Parental gene: | UBLCP1, ENSMODG00000008063 |
| Aliases: | None |
| Description: | ubiquitin-like domain containing CTD phosphatase 1 [Source:HGNC Symbol;Acc:28110] |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | 1:354654638..354672371(+) |
>ENSMODG00000008063
ATGTCTCTCTCTCTCATAATAAAATGGGGTGGACAGGAATATTTAATAACCACACTTTCCGAAGAAGATACGGTGCTGGA
CCTCAAGCAGTCCCTCAAGACACTTACAGGAGTGCTCCCGGAACGCCAAAAGTTGCTTGGTCTAAAGGTTAAAGGCAAAC
CTGCAGAAAATGACGTTAAGCTTGGAGCTCTCAAACTGAAACCAAATACTAAAATCATGATGATGGGAACTCGAGAGGAG
AGCTTGGAAGATGTCTTAGGCCCACCACCTGACAATGATGATGTTGTCAATGATTTTGATATTGAAGAGGAAGTAGTTGA
AGTAGAAAATAGGGAAGAAAACCTGCTAAAAATTTCTAGAAGAGTTAAAGATTACAAAGTGGAAATTTTGAATCCTCCTA
GGGAAGGAAAAAAACTTTTGGTACTAGATGTTGATTATACATTGTTTGATCATAGGTCCTGTGCAGAAACTGGGGTAGAA
TTAATGCGGCCATATCTTCATGAATTCTTAACATCTGCATATGAAGATTATGACATAGTTATTTGGTCTGCTACAAATAT
GAAGTGGATTGAAGCTAAAATGAAGGAACTGGGAGTAAGTACGAATGCAAACTATAAGATCACCTTCATGTTGGACAGTG
CTGCTATGATAACAGTGCATACCCCAAGAAGAGGCCTAATAGATGTAAAACCTCTTGGTGTTATATGGGGAAAATTTTCA
GAGTTTTACAGCAAAAAAAATACCATTATGTTTGATGATATCGGAAGAAATTTTCTTATGAACCCACAGAATGGATTAAA
GATAAGGCCTTTTATGAAAGCTCATCTAAATAGAGATAAAGATAAAGAACTTTTAAAGTTAACCCAATACCTCAAGGAAA
TAGCAAAATTAGATGACTTTTTGGAGCTGAATCACAAGCATTGGGAAAGGTATCTCTCAAAGAAGCAAGGGCAGTAG
ATGTCTCTCTCTCTCATAATAAAATGGGGTGGACAGGAATATTTAATAACCACACTTTCCGAAGAAGATACGGTGCTGGA
CCTCAAGCAGTCCCTCAAGACACTTACAGGAGTGCTCCCGGAACGCCAAAAGTTGCTTGGTCTAAAGGTTAAAGGCAAAC
CTGCAGAAAATGACGTTAAGCTTGGAGCTCTCAAACTGAAACCAAATACTAAAATCATGATGATGGGAACTCGAGAGGAG
AGCTTGGAAGATGTCTTAGGCCCACCACCTGACAATGATGATGTTGTCAATGATTTTGATATTGAAGAGGAAGTAGTTGA
AGTAGAAAATAGGGAAGAAAACCTGCTAAAAATTTCTAGAAGAGTTAAAGATTACAAAGTGGAAATTTTGAATCCTCCTA
GGGAAGGAAAAAAACTTTTGGTACTAGATGTTGATTATACATTGTTTGATCATAGGTCCTGTGCAGAAACTGGGGTAGAA
TTAATGCGGCCATATCTTCATGAATTCTTAACATCTGCATATGAAGATTATGACATAGTTATTTGGTCTGCTACAAATAT
GAAGTGGATTGAAGCTAAAATGAAGGAACTGGGAGTAAGTACGAATGCAAACTATAAGATCACCTTCATGTTGGACAGTG
CTGCTATGATAACAGTGCATACCCCAAGAAGAGGCCTAATAGATGTAAAACCTCTTGGTGTTATATGGGGAAAATTTTCA
GAGTTTTACAGCAAAAAAAATACCATTATGTTTGATGATATCGGAAGAAATTTTCTTATGAACCCACAGAATGGATTAAA
GATAAGGCCTTTTATGAAAGCTCATCTAAATAGAGATAAAGATAAAGAACTTTTAAAGTTAACCCAATACCTCAAGGAAA
TAGCAAAATTAGATGACTTTTTGGAGCTGAATCACAAGCATTGGGAAAGGTATCTCTCAAAGAAGCAAGGGCAGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 49 .71 RPM |
| SRP007412_cerebellum | 31 .34 RPM |
| SRP007412_heart | 35 .48 RPM |
| SRP007412_kidney | 31 .60 RPM |
| SRP007412_liver | 19 .64 RPM |
| SRP007412_testis | 76 .81 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000007691 | ortholog_one2many | 1 retrogene | |
| Echinops telfairi | ENSETEG00000000170 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000010060 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000006359 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000013396 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000041231 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000002224 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000008983 | ortholog_one2many | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000005876 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_1251 | 92.33 | 93.71 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mdom_1351 | 91.67 | 93.71 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMODG00000008063 retrocopies