Parental gene: | ARFGAP2, ENSOCUG00000002073 |
| Aliases: | None |
| Description: | ADP-ribosylation factor GTPase activating protein 2 [Source:HGNC Symbol;Acc:13504] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 1:186537948..186549031(-) |
>ENSOCUG00000002073
ATGGCGGCGGAACCGAGCAAGACCGAAATCCAGACTCTTTTTAAGAGGCTTCGCGCAATTCCCACCAACAAGGCCTGTTT
CGACTGCGGCGCCAAGAATCCGAGCTGGGCCAGCATCACGTATGGTGTTTTCTTGTGCATTGACTGCTGCGGGGTCCACC
GCTCCCTGGGCGTCCATCTCAGCTTCATCAGGTCCACAGAGCTGGATTCCAACTGGAGCTGGTTCCAGCTGAGGTGTATG
CAGGTCGGCGGGAATGCCAACGCGACAGCCTTTTTCCGCCAGCACGGCTGCACAGCCAGTGATGCCAACAGCAAATACAA
CAGCCGAGCAGCCCAGATGTACCGGGAGAAGATCCGGCAGCTGGGGAGTGCGGCGCTGGCCCGGCATGGCACTGACCTCT
GGATAGACAACGTGAGCAGTGCTCCCGGCCACTCCCCAGAGAAGAAGGACTCGGATTTCTTCACGGAGCACACTCAGCCC
CCTGCCTGGGATGTGCCAGCCGCTGAGCCTGCAGGGATCCAGCAGCCAGCCCCGTCCGCAGAGAGCAGTGGCCTGGCCCA
GCCGGAGCATGGCCCCAACACCGACCTGCTTGGCACCTCGCCCAAGGCACCTCTGGAACTGAAAAGCTCCATCATTGGGA
AGAAGAAGCCAGCAGCAGCTAAGAAAGGGCTGGGTGCTAAGAAAGGCCTGGGCGCCCAGAAGGTGAGCAGCCAGAGCTTC
AGCGAGATCGAGCGGCAGGCCCAGGTGGCAGAGAAGCTCCGTGAGCAGCAGGTGGCGGATGCGAAGAAGCAGGCCGAGGA
GTCCATGGTCGCCTCCATGCGTCTGGCCTACCAGGAGCTTCAGCTTGATCGGAAGAAGGAGGAGAAACAGCTCCAGAATC
TGGAGGGGAAGAAGCGAGAGCAGGCGGAGCGGCTGGGCATGGGCTTGGTGAGCCGGAGCTCTGTGTCGCACTCGGTGCTG
TCCGAGATGCAGGTGATCGAGCAGGAGACCCCAGTGACCGCCAAGTCCTCCCGCTCGCAACTGGACCTATTTGACGACGT
TGGGACGTTCGCCTCTGGACCCCCAAAGTACAAGGACAACCCCTTTTCCTTGGGGGAAAGTTTTGGTTCCCGCTGGGATA
CGGATACCACTTGGGGCATGGACAGGGTAGAGGAGAAGGAGCCAGAAGTGACCATCTCGAGCATCCGGCCCATTTCGGAA
AGAGCCACAAACCGGAGGGACGTGGAGAGCCGGAGCTCGGGCCTCGAGTCCAGCGAAGCACGCCAGAAGTTTGCAGGTGC
AAAAGCCATCTCATCTGACATGTTCTTTGGGCGGGAGGTGGACGTTGAGTATGAAGCCAGGTCTCGGCTGCAGCAGCTCG
CGGGCAGCAGCGCCATCAGCTCTTCAGACCTCTTTGGGGACATGGATGGAGCCCATGGAGCAGGAAGCGTGTCTCTGGGC
AATGTGCTCCCCTCGGCGGACATCGCCCAGTTTAAGCAGGGTGTCAAGTCTGTGGCCGGGAAGATGGCTGTGCTGGCCAA
TGGCGTGATGAATTCTTTGCAGGATCGCTACGGTTCCTACTGA
ATGGCGGCGGAACCGAGCAAGACCGAAATCCAGACTCTTTTTAAGAGGCTTCGCGCAATTCCCACCAACAAGGCCTGTTT
CGACTGCGGCGCCAAGAATCCGAGCTGGGCCAGCATCACGTATGGTGTTTTCTTGTGCATTGACTGCTGCGGGGTCCACC
GCTCCCTGGGCGTCCATCTCAGCTTCATCAGGTCCACAGAGCTGGATTCCAACTGGAGCTGGTTCCAGCTGAGGTGTATG
CAGGTCGGCGGGAATGCCAACGCGACAGCCTTTTTCCGCCAGCACGGCTGCACAGCCAGTGATGCCAACAGCAAATACAA
CAGCCGAGCAGCCCAGATGTACCGGGAGAAGATCCGGCAGCTGGGGAGTGCGGCGCTGGCCCGGCATGGCACTGACCTCT
GGATAGACAACGTGAGCAGTGCTCCCGGCCACTCCCCAGAGAAGAAGGACTCGGATTTCTTCACGGAGCACACTCAGCCC
CCTGCCTGGGATGTGCCAGCCGCTGAGCCTGCAGGGATCCAGCAGCCAGCCCCGTCCGCAGAGAGCAGTGGCCTGGCCCA
GCCGGAGCATGGCCCCAACACCGACCTGCTTGGCACCTCGCCCAAGGCACCTCTGGAACTGAAAAGCTCCATCATTGGGA
AGAAGAAGCCAGCAGCAGCTAAGAAAGGGCTGGGTGCTAAGAAAGGCCTGGGCGCCCAGAAGGTGAGCAGCCAGAGCTTC
AGCGAGATCGAGCGGCAGGCCCAGGTGGCAGAGAAGCTCCGTGAGCAGCAGGTGGCGGATGCGAAGAAGCAGGCCGAGGA
GTCCATGGTCGCCTCCATGCGTCTGGCCTACCAGGAGCTTCAGCTTGATCGGAAGAAGGAGGAGAAACAGCTCCAGAATC
TGGAGGGGAAGAAGCGAGAGCAGGCGGAGCGGCTGGGCATGGGCTTGGTGAGCCGGAGCTCTGTGTCGCACTCGGTGCTG
TCCGAGATGCAGGTGATCGAGCAGGAGACCCCAGTGACCGCCAAGTCCTCCCGCTCGCAACTGGACCTATTTGACGACGT
TGGGACGTTCGCCTCTGGACCCCCAAAGTACAAGGACAACCCCTTTTCCTTGGGGGAAAGTTTTGGTTCCCGCTGGGATA
CGGATACCACTTGGGGCATGGACAGGGTAGAGGAGAAGGAGCCAGAAGTGACCATCTCGAGCATCCGGCCCATTTCGGAA
AGAGCCACAAACCGGAGGGACGTGGAGAGCCGGAGCTCGGGCCTCGAGTCCAGCGAAGCACGCCAGAAGTTTGCAGGTGC
AAAAGCCATCTCATCTGACATGTTCTTTGGGCGGGAGGTGGACGTTGAGTATGAAGCCAGGTCTCGGCTGCAGCAGCTCG
CGGGCAGCAGCGCCATCAGCTCTTCAGACCTCTTTGGGGACATGGATGGAGCCCATGGAGCAGGAAGCGTGTCTCTGGGC
AATGTGCTCCCCTCGGCGGACATCGCCCAGTTTAAGCAGGGTGTCAAGTCTGTGGCCGGGAAGATGGCTGTGCTGGCCAA
TGGCGTGATGAATTCTTTGCAGGATCGCTACGGTTCCTACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 239 .01 RPM |
| SRP017611_kidney | 100 .65 RPM |
| SRP017611_brain | 70 .53 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000019965 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000004984 | ortholog_one2many | 1 retrogene | |
| Microcebus murinus | ENSMICG00000007019 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000027255 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_599 | 90.52 | 58.85 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ocun_1769 | 88.33 | 57.69 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000002073 retrocopies