Parental gene:

ENSOCUG00000001353

Aliases:None
Description:None
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:2:30395305..30409319(+)


>ENSOCUG00000001353
ATGCAGCTCAAGCCAATGGAGATTAACCCCGAGATGCTGAACAAAGTGCTGAGCCGGCTGGGCGTCGCCGGCCAGTATCG
TTTCGCTGACGTGCTGGGGCTGGAGGAGGAGACCCTGGGCACTGTGCCAGCGCCCGCCTGCGCGCTGCTGCTGCTGTTCC
CCCTCACTGCCCAGCATGAGAACTTCAGGAAAAAGCAGATTGAAGAGCTGAAGGGACAAGAGGTTAGTCCCAAGGTGTAC
TTCATGAAGCAGACCATCGGGAACTCCTGCGGCACCGTCGGGCTGATCCATGCCGTGGCCAATAACCAAGACAAACTGCA
GTTTGAGGACGGATCAGTGCTGAAACAGTTTCTGTCTGAAACGGAGAAGATGTCCCCTGAAGACAGAGCAAAATGCTTTG
AAAAGAACGAGGCCATACAGGCAGCCCATGATGCCGTGGCACAAGAAGGCCAATGTCGGGTAGATGACAAAGTGAACTTC
CATTTCATCCTGTTTAACAACGTGGACGGCCACCTCTATGAACTTGATGGGCGAATGCCTTTCCCGGTGAACCACGGCGC
CAGCTCAGAGGACTCCCTGCTGCAGGATGCTGCCAAGGTGTGCAGGGAATTCACTGAGCGCGAGCAAGGAGAGGTGCGCT
TCTCCGCCGTGGCCCTGTGCAAGGCAGCCTAA

Library Parental gene expression (RPM)
SRP017611_liver 0 .69 RPM
SRP017611_kidney 9 .02 RPM
SRP017611_brain 472 .96 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000003295 ortholog_one2one 1 retrogene
retro_chof_1737,
Callithrix jacchus ENSCJAG00000019346 possible_ortholog 1 retrogene
retro_cjac_365,
Erinaceus europaeus ENSEEUG00000002185 possible_ortholog 3 retrogenes
retro_eeur_150, retro_eeur_573, retro_eeur_598,
Echinops telfairi ENSETEG00000012347 possible_ortholog 1 retrogene
retro_etel_44,
Felis catus ENSFCAG00000025457 ortholog_one2one 1 retrogene
retro_fcat_1321,
Homo sapiens ENSG00000154277 possible_ortholog 2 retrogenes
retro_hsap_781, retro_hsap_782,
Gorilla gorilla ENSGGOG00000008809 possible_ortholog 1 retrogene
retro_ggor_648,
Macropus eugenii ENSMEUG00000013774 ortholog_many2many 1 retrogene
retro_meug_8,
Myotis lucifugus ENSMLUG00000010138 possible_ortholog 2 retrogenes
retro_mluc_1216, retro_mluc_2113,
Nomascus leucogenys ENSNLEG00000017176 possible_ortholog 2 retrogenes
retro_nleu_2582, retro_nleu_2583,
Oryctolagus cuniculus ENSOCUG00000006789 within_species_paralog 1 retrogene
retro_ocun_382,
Pan troglodytes ENSPTRG00000016009 possible_ortholog 2 retrogenes
retro_ptro_3028, retro_ptro_3029,
Ictidomys tridecemlineatus ENSSTOG00000015507 ortholog_one2one 1 retrogene
retro_itri_288,
Tupaia belangeri ENSTBEG00000011438 ortholog_one2one 1 retrogene
retro_tbel_306,
Tarsius syrichta ENSTSYG00000008305 possible_ortholog 1 retrogene
retro_tsyr_1191,
Tursiops truncatus ENSTTRG00000012095 ortholog_one2one 1 retrogene
retro_ttru_1370,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_309 93.80 57.40
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Download FASTA sequences of all ENSOCUG00000001353 retrocopies