Parental gene:

VAMP7, ENSOCUG00000001270

Aliases:None
Description:vesicle-associated membrane protein 7 [Source:HGNC Symbol;Acc:11486]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:GL018783:16087..75318(-)


>ENSOCUG00000001270
ATGGCCATTCTTTTTGCTGTTGTTGCCAGGGGAACCACTATCCTTGCCAAACATGCTTGGTGTGGAGGAAACTTCCTTGA
GGTTACGGAGCAGATTCTGGCCAAGATACCTTCTGAAAATAACAAACTAACTTACTCACATGGCAATTATTTGTTTCATT
ACATCTGCCAAGACAGGATTGTGTATCTTTGTATCACTGATGATGATTTTGAACGGTCCCGAGCCTTTAATTTTCTGAAT
GAGGTAAAGAAGAGATTTCAAACTACTTATGGTTCAAGAGCACAGACAGCCCTTCCATATGCCATGAATAGCGAGTTCTC
AAGTGTCTTGGCTGCACAACTGAAACATCACTCTGAGAATAAGGGCCTAGACAAAGTGATGGAGACTCAAGCCCAAGTGG
ATGAACTGAAAGGAATCATGGTCAGAAACATAGATCTAGTAGCTCAGCGAGGAGAAAGATTGGAATTATTGATAGACAAA
ACAGAAAATCTTGTGGATTCATCTGTCACCTTCAAAACTACCAGCAGAAATCTTGCCCGAGCCATGTGTATGAAGAATCT
CAAGCTTACTATCATCATCATCATTGTGTCAATTGTGTTCATCTATATCATTGTGTCAACTCTCTGTGGTGGATTTACTT
GGCCAAACTGTGTGAAGAAATAA

Library Parental gene expression (RPM)
SRP017611_liver 15 .18 RPM
SRP017611_kidney 61 .42 RPM
SRP017611_brain 44 .92 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000016289 ortholog_one2one 2 retrogenes
retro_cjac_1958, retro_cjac_2410,
Cavia porcellus ENSCPOG00000024405 ortholog_one2one 1 retrogene
retro_cpor_714,
Mus musculus ENSMUSG00000051412 ortholog_one2one 1 retrogene
retro_mmus_2131,
Pteropus vampyrus ENSPVAG00000000829 ortholog_one2one 1 retrogene
retro_pvam_513,
Ictidomys tridecemlineatus ENSSTOG00000025036 ortholog_one2one 1 retrogene
retro_itri_720,
Tursiops truncatus ENSTTRG00000010643 ortholog_one2one 1 retrogene
retro_ttru_66,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_842 76.82 99.09
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Download FASTA sequences of all ENSOCUG00000001270 retrocopies