Parental gene:

Vamp7, ENSMUSG00000051412

Aliases:Vamp7, Sybl1, TI-VAMP, VAMP-7
Description:vesicle-associated membrane protein 7 [Source:MGI Symbol;Acc:MGI:1096399]
Organism:Mouse (Mus musculus)
Coordinates:GL456233.1:10737..39148(-)


>ENSMUSG00000051412
ATGGCCATTCTTTTTGCTGTTGTTGCCAGGGGAACCACTATCCTTGCCAAACATGCTTGGTGTGGAGGAAACTTCCTGGA
GGTGACAGAGCAGATTCTGGCTAAGATACCTTCTGAAAATAATAAACTAACTTACTCACATGGCAATTATTTGTTTCATT
ACATCTGCCAAGACAGGATTGTGTATCTTTGTATCACTGATGATGATTTTGAGCGTTCTCGAGCGTTCAGTTTTTTGAAT
GAAGTAAAGAAGAGATTCCAGACAACTTACGGTTCAAGAGCACAAACTGCACTTCCTTATGCTATGAATAGCGAGTTTTC
AAGTGTTTTGGCTGCACAACTGAAGCATCACTCTGAGAATAAGAGCCTAGACAAAGTGATGGAGACTCAAGCACAAGTGG
ATGAACTGAAAGGAATAATGGTCAGAAACATAGATTTAGTTGCTCAACGTGGAGAAAGGTTGGAATTGCTGATAGATAAA
ACAGAAAACCTTGTGGATTCATCTGTCACTTTCAAAACTACCAGCAGAAATCTTGCTCGAGCCATGTGTATGAAGAATAT
CAAGCTCACTATCATCATCATCATTGTATCAATTGTGTTCATCTATATCATTGTGTCACTTCTCTGTGGTGGGTTTACAT
GGCCAAACTGTGTGAAGAAATAA

Library Parental gene expression (RPM)
SRP007412_brain 18 .39 RPM
SRP007412_cerebellum 13 .50 RPM
SRP007412_heart 6 .51 RPM
SRP007412_kidney 11 .49 RPM
SRP007412_liver 18 .32 RPM
SRP007412_testis 1 .10 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000016289 ortholog_one2one 2 retrogenes
retro_cjac_1958, retro_cjac_2410,
Cavia porcellus ENSCPOG00000024405 ortholog_one2one 1 retrogene
retro_cpor_714,
Oryctolagus cuniculus ENSOCUG00000001270 ortholog_one2one 1 retrogene
retro_ocun_842,
Pteropus vampyrus ENSPVAG00000000829 ortholog_one2one 1 retrogene
retro_pvam_513,
Ictidomys tridecemlineatus ENSSTOG00000025036 ortholog_one2one 1 retrogene
retro_itri_720,
Tursiops truncatus ENSTTRG00000010643 ortholog_one2one 1 retrogene
retro_ttru_66,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_2131 90.29 79.09
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Download FASTA sequences of all ENSMUSG00000051412 retrocopies