Parental gene: | HTATIP2, ENSOCUG00000000749 |
| Aliases: | None |
| Description: | HIV-1 Tat interactive protein 2, 30kDa [Source:HGNC Symbol;Acc:16637] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 1:159269549..159292300(+) |
>ENSOCUG00000000749
ATGCGCGGGCCCGCGGCACTGGGCGCGGCGGCGAGCGCGCTGGTGGCCGCCTTGCTCCTGCTGCTGCGTGAGGACGCGGG
GCCCGGTGCGGCCCCAGGGGACCCCGCCGGCATGGCCGAGGCCGAGGAGCTGCCGAAGCTTCGGGAAGACTTCAGGATGC
AGAACAAATCTGTCTTTATTCTGGGCGCCAGCGGGGAAACCGGCAAAGTGCTCTTGAAAGAAATCCTGGAACAGAGATTG
TTTTCCAGAGTCACTCTTATTGGCCGGAGGAAGCTCACCTTCGACGAGGAAGCTTATAAAAATGTGAATCAAGAGGTGGT
GGACTTTGAGAAGTTGGATGACTACGCTGCTGCCTTTCAAGGTCACGATGTTGGATTCTGTTGTTTGGGTACCACCAGAA
AAAAGGCCGGGGCGGAGGGATTTGTTCGTGTCGACCGAGATTATGTGCTGAAGTCTGCAGAGCTGGCAAAAGCTGGAGGG
TGCAAACATTTCAACTTGCTGTCTTCTAAAGGAGCTGATAAGTCGAGCAATTTTTTATATCTACAAGTTAAGGGGGAAGT
GGAGGCCAGAGTTGAAGAATTAAACTTCGATCGCTACTCAATATTTAGGCCTGGAGTTCTGTTATGTGACAGGCAAGAAT
CTCGCCCAGGTGAATGGATGGTTAGGAAATTCTTTGGTTCTTTACCAGAATCCTGGGCCCGTGGGCAATCTGTGCCTGTG
GTGACCGTGGCTAGAGCAATGCTTAACAACATGGTGAGACTGAGCGACAAGAAGATGGAACTTCTGGAAAACAAGGGCAT
CCACGACCTGGGGAAGGCCAATGGCTCTCTCAAGCCATGA
ATGCGCGGGCCCGCGGCACTGGGCGCGGCGGCGAGCGCGCTGGTGGCCGCCTTGCTCCTGCTGCTGCGTGAGGACGCGGG
GCCCGGTGCGGCCCCAGGGGACCCCGCCGGCATGGCCGAGGCCGAGGAGCTGCCGAAGCTTCGGGAAGACTTCAGGATGC
AGAACAAATCTGTCTTTATTCTGGGCGCCAGCGGGGAAACCGGCAAAGTGCTCTTGAAAGAAATCCTGGAACAGAGATTG
TTTTCCAGAGTCACTCTTATTGGCCGGAGGAAGCTCACCTTCGACGAGGAAGCTTATAAAAATGTGAATCAAGAGGTGGT
GGACTTTGAGAAGTTGGATGACTACGCTGCTGCCTTTCAAGGTCACGATGTTGGATTCTGTTGTTTGGGTACCACCAGAA
AAAAGGCCGGGGCGGAGGGATTTGTTCGTGTCGACCGAGATTATGTGCTGAAGTCTGCAGAGCTGGCAAAAGCTGGAGGG
TGCAAACATTTCAACTTGCTGTCTTCTAAAGGAGCTGATAAGTCGAGCAATTTTTTATATCTACAAGTTAAGGGGGAAGT
GGAGGCCAGAGTTGAAGAATTAAACTTCGATCGCTACTCAATATTTAGGCCTGGAGTTCTGTTATGTGACAGGCAAGAAT
CTCGCCCAGGTGAATGGATGGTTAGGAAATTCTTTGGTTCTTTACCAGAATCCTGGGCCCGTGGGCAATCTGTGCCTGTG
GTGACCGTGGCTAGAGCAATGCTTAACAACATGGTGAGACTGAGCGACAAGAAGATGGAACTTCTGGAAAACAAGGGCAT
CCACGACCTGGGGAAGGCCAATGGCTCTCTCAAGCCATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 23 .43 RPM |
| SRP017611_kidney | 19 .66 RPM |
| SRP017611_brain | 21 .36 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000006718 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000018703 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000003421 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000011216 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_822 | 71.60 | 57.71 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000000749 retrocopies