Parental gene:

HTATIP2, ENSCJAG00000006718

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:11:83751359..83768975(+)


>ENSCJAG00000006718
ATGGCCGGGCCCGCGGTGGTGAGCGCGGCGGCGGCGGCGGCGGCGGCTGCGGTGGCCGTCCTGCTCCTGCTGCGGCGTGA
AGACCCGGGGCCGGGGGCTGGCCCTAGCATGGCCGAAACAGAAGCACTGTCGAAGCTTCGGGAAGACTTCAGGATGCAGA
ATAAATCCGTCTTTATTTTGGGCGCCAGCGGAGAAACCGGCCGAGTGCTCTTAAAGGAAATCCTGGAGCAGGCCCTGTTT
TCCAAAGTCACGCTCATTGGCAGGAGGAAGCTCACCTTCGAGGAGGAAGCTTATAAAAATGTGAATCAAGAATTGGTGGA
CTTTGAAAAGTTGGATGACTATGCTTCTGCCTTTCAAGGTCATGATGTTGGATTCTGTTGCCTGGGTACCACCAGAGTGA
AAGCCGGGGCGGAGGGATTTGTTCGGGTTGACCGAGATTATGTGCTGAGGTCTGCAGAGCTGGCAAAAGCTGGAGGGTGC
AAACATTTCAACTTGCTATCCTCTAAAGGAGCTGATAAGTCAAGCAGTTTTTTATATCTACAAGTTAAGGGAGAAGTGGA
AGCCAGGGTTGAAGAATTAAAATTTGATCGTTACTCTGTATTTAGGCCTGGAGTTCTGTTATGTGATAGGCAAGAATCTC
GCCCAGGTGAATGGTTCGTTAGAAAGTTCTTTGGCTCCTTACCAGCATCTTGGGCTAGTGGGCATTCTGTGCCTGTGGTG
ACTGTGGTTAGAGCAATGCTGAACAATGCAGTGAGACCAAGCGACAAGAAGATGGAACTGCTGGAGAACAAGGCCATCCA
TGATCTGGGGAAAGCGGATGGCTCTCTCAAGCCG

Library Parental gene expression (RPM)
SRP051959_spleen 13 .55 RPM
SRP051959_skeletal_muscle 11 .97 RPM
SRP051959_lymph_node 8 .31 RPM
SRP051959_lung 13 .06 RPM
SRP051959_liver 9 .73 RPM
SRP051959_kidney 13 .38 RPM
SRP051959_heart 6 .42 RPM
SRP051959_colon 10 .10 RPM



Species Parental gene accession Homology type Retrogenes number
Loxodonta africana ENSLAFG00000018703 ortholog_one2one 1 retrogene
retro_lafr_244,
Oryctolagus cuniculus ENSOCUG00000000749 ortholog_one2one 1 retrogene
retro_ocun_822,
Pongo abelii ENSPPYG00000003421 ortholog_one2one 1 retrogene
retro_pabe_1288,
Ictidomys tridecemlineatus ENSSTOG00000011216 ortholog_one2one 2 retrogenes
retro_itri_1354, retro_itri_1523,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_967 80.83 96.71
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Download FASTA sequences of all ENSCJAG00000006718 retrocopies