Parental gene:

PPP4C, ENSOANG00000008136

Aliases:None
Description:protein phosphatase 4, catalytic subunit [Source:HGNC Symbol;Acc:9319]
Organism:Platypus (Ornithorhynchus anatinus)
Coordinates:4:7645853..7652980(+)


>ENSOANG00000008136
ATGGCAGAGATCAGCGACCTGGACCGGCAGATCGAGCAGCTGCGGCGCTGCGAGCTCATCAAGGAGAGCGAGGTCAAGGC
ACTCTGTGCCAAGGCCAGGGAAATCTTGGTGGAGGAGAGCAATGTACAGAGGGTGGATTCTCCCGTCACGGTATGCGGGG
ACATCCACGGACAATTCTATGACCTCAAAGAGCTATTTAGGGTGACTGGGAGCGCACCGAAGAGGGAGGGGGTAAGTGTG
TGGATTAACGAGCCCAGGGGCTTGGATGGAGAGGAAAGGGCAGACTTTAGCAATGCTGCGAAGGTGCGCTACCCTGACCG
CATCACTCTGATTCGGGGAAATCACGAGAGCCGGCAGATCACCCAGGTGTACGGCTTCTACGACGAGTGTCTGCGCAAGT
ACGGCTCGGTGACCGTCTGGCGCTACTGCACCGAGATCTTCGACTACCTCAGCCTGTCCGCCATCATCGACGGCAAGATC
TTCTGTGTGCACGGGGGCCTCTCCCCCTCCATCCAGACCCTGGACCAGATCCGGACGATCGACCGGAAGCAGGAGGTGCC
GCACGACGGGCCTATGTGTGACCTTCTCTGGTCGGACCCCGAAGACACGACGGGCTGGGGGGTGAGCCCCCGGGGGGCAG
GGTACCTGTTCGGCAGTGACGTGGTGGCCCAGTTCAATGCAGCCAATGACATCGACATGATTTGCCGGGCCCACCAGTTG
GTCATGGAGGGCTACAAATGGCATTTCAACGAGACCGTTCTCACCGTCTGGTCCGCGCCCAACTACTGTTACCGCTGTGG
GAATGTGGCCGCCATTTTGGAACTGGATGAACACCTGCAGAAGGACTTCATCATCTTCGAAGCAGCACCCCAGGAGACCC
GGGGCATTCCTTCCAAGAAGCCCGTGGCCGACTACTTCCTGTGA

Library Parental gene expression (RPM)
SRP007412_brain 19 .69 RPM
SRP007412_cerebellum 45 .78 RPM
SRP007412_heart 14 .88 RPM
SRP007412_kidney 16 .58 RPM
SRP007412_liver 14 .74 RPM
SRP007412_testis 23 .84 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000015223 ortholog_one2one 1 retrogene
retro_amel_286,
Canis familiaris ENSCAFG00000017089 ortholog_one2one 1 retrogene
retro_cfam_16,
Ciona savignyi ENSCSAVG00000004266 ortholog_one2one 1 retrogene
retro_csav_27,
Equus caballus ENSECAG00000022179 ortholog_one2one 1 retrogene
retro_ecab_911,
Felis catus ENSFCAG00000014171 ortholog_one2one 1 retrogene
retro_fcat_1043,
Macropus eugenii ENSMEUG00000000397 ortholog_one2one 5 retrogenes
retro_meug_1014, retro_meug_1188, retro_meug_1336, retro_meug_560, retro_meug_859,
Pan troglodytes ENSPTRG00000007984 ortholog_one2one 1 retrogene
retro_ptro_28,
Tursiops truncatus ENSTTRG00000005532 ortholog_one2one 1 retrogene
retro_ttru_1015,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_oana_25 68.09 83.71
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSOANG00000008136 retrocopies