Parental gene:

PPP4C, ENSFCAG00000014171

Aliases:None
Description:protein phosphatase 4, catalytic subunit [Source:HGNC Symbol;Acc:9319]
Organism:Cat (Felis catus)
Coordinates:E3:20592661..20599740(+)


>ENSFCAG00000014171
ATGGCGGAGATCAGCGACCTGGACCGGCAGATCGAGCAACTGCGGCGCTGCGAGCTCATCAAAGAGAGCGAAGTCAAGGC
CCTGTGCGCTAAGGCCAGAGAGATCTTGGTAGAGGAGAGCAACGTACAGAGGGTGGACTCGCCAGTCACAGTATGCGGCG
ACATCCACGGGCAATTCTATGACCTCAAGGAGCTGTTCAGAGTGGGTGGCGACGTCCCTGAGACCAACTACCTCTTCATG
GGGGACTTTGTGGATCGTGGTTTCTACAGCGTTGAAACGTTCCTCCTGCTGCTGGCACTTAAGGTTCGCTATCCTGACCG
AATCACCCTGATCCGGGGCAACCACGAAAGCCGCCAGATCACCCAGGTCTACGGCTTCTACGACGAGTGTCTGCGCAAAT
ATGGCTCGGTGACCGTGTGGCGTTACTGCACTGAGATCTTTGACTACCTCAGCCTGTCGGCCATCATCGATGGCAAGATC
TTCTGCGTGCATGGGGGCCTCTCCCCCTCTATCCAGACCCTGGACCAGATCCGGACGATTGACCGAAAGCAAGAAGTGCC
CCATGACGGGCCCATGTGTGACCTGCTCTGGTCTGACCCTGAAGACACAACAGGCTGGGGCGTGAGCCCCCGTGGGGCTG
GCTACCTGTTTGGCAGTGACGTGGTGGCCCAGTTTAATGCAGCCAACGACATTGACATGATCTGTCGCGCCCACCAACTG
GTGATGGAAGGTTATAAGTGGCACTTCAATGAGACTGTGCTCACTGTGTGGTCGGCTCCCAACTACTGCTACCGCTGTGG
GAATGTGGCAGCCATCTTGGAGCTAGATGAGCATCTCCAGAAAGATTTCATCATCTTCGAGGCTGCGCCCCAAGAGACCC
GGGGCATCCCCTCCAAGAAACCCGTGGCCGATTACTTCCTGTGA

Library Parental gene expression (RPM)
SRP017611_liver 10 .51 RPM
SRP017611_kidney 22 .05 RPM
SRP017611_brain 12 .62 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000015223 ortholog_one2one 1 retrogene
retro_amel_286,
Canis familiaris ENSCAFG00000017089 ortholog_one2one 1 retrogene
retro_cfam_16,
Ciona savignyi ENSCSAVG00000004266 ortholog_one2one 1 retrogene
retro_csav_27,
Equus caballus ENSECAG00000022179 ortholog_one2one 1 retrogene
retro_ecab_911,
Felis catus ENSFCAG00000025139 within_species_paralog 1 retrogene
retro_fcat_1884,
Felis catus ENSFCAG00000029685 within_species_paralog 1 retrogene
retro_fcat_1086,
Macropus eugenii ENSMEUG00000000397 ortholog_one2one 5 retrogenes
retro_meug_1014, retro_meug_1188, retro_meug_1336, retro_meug_560, retro_meug_859,
Ornithorhynchus anatinus ENSOANG00000008136 ortholog_one2one 1 retrogene
retro_oana_25,
Pan troglodytes ENSPTRG00000007984 ortholog_one2one 1 retrogene
retro_ptro_28,
Tursiops truncatus ENSTTRG00000005532 ortholog_one2one 1 retrogene
retro_ttru_1015,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_1043 64.46 53.09
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Download FASTA sequences of all ENSFCAG00000014171 retrocopies