Parental gene:

Gm20390, ENSMUSG00000091228

Aliases:None
Description:predicted gene 20390 [Source:MGI Symbol;Acc:MGI:5141855]
Organism:Mouse (Mus musculus)
Coordinates:11:93949818..93968293(-)


>ENSMUSG00000091228
ATGGCCAACAGTGAGCGCACCTTCATTGCCATCAAGCCTGATGGGGTCCAGCGGGGGCTGGTGGGCGAGATCATCAAGCG
GTTCGAGCAGAAGGGGTTCCGCCTTGTTGGTCTGAAGTTTCTGCAGGCTTCAGAGGACCTTCTCAAGGAGCACTACACTG
ACCTGAAGGACCGCCCCTTCTTTACTGGCCTGGTGAAATACATGCACTCAGGACCAGTGGTTGCTATGGTCTGGGAGGGT
CTGAATGTGGTGAAGACAGGCCGCGTGATGCTTGGAGAGACCAACCCCGCAGACTCTAAGCCTGGGACCATACGAGGAGA
CTTCTGCATCCAAGTTGGCAGGACCATGGCCAACCTCGAGCGTACCTTCATTGCCATCAAGCCAGATGGCGTGCAGCGCG
GCCTGGTGGGCGAGATCATCAAACGGTTCGAGCAGAAGGGGTTCCGCCTGGTGGCCATGAAGTTCCTTCGGGCCTCTGAA
GAACACCTGAAGCAGCATTACATCGACCTGAAAGACCGTCCTTTCTTCCCGGGGCTGGTGAAGTACATGAACTCGGGGCC
CGTGGTGGCCATGGTCTGGGAGGGGCTCAATGTGGTGAAAACGGGCCGAGTGATGCTGGGGGAGACCAATCCAGCTGATT
CAAAACCAGGCACCATCCGTGGGGATTTCTGCATTCAAGTTGGCAGGAACATCATTCATGGCAGTGATTCAGTGGAGAGT
GCTGAGAAAGAGATCCATCTGTGGTTTAAGCCCGAAGAACTGATCGACTACAAGTCTTGTGCCCATGACTGGGTGTACGA
GTAG

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000004651 possible_ortholog 1 retrogene
retro_btau_1707,
Canis familiaris ENSCAFG00000023628 possible_ortholog 7 retrogenes
retro_cfam_117, retro_cfam_1645, retro_cfam_37, retro_cfam_676, retro_cfam_69, retro_cfam_832, retro_cfam_96,
Cavia porcellus ENSCPOG00000008413 ortholog_one2one 1 retrogene
retro_cpor_599,
Echinops telfairi ENSETEG00000005563 ortholog_one2one 4 retrogenes
retro_etel_242, retro_etel_547, retro_etel_71, retro_etel_803,
Gorilla gorilla ENSGGOG00000016526 possible_ortholog 1 retrogene
retro_ggor_71,
Monodelphis domestica ENSMODG00000028492 possible_ortholog 1 retrogene
retro_mdom_503,
Mustela putorius furo ENSMPUG00000015559 possible_ortholog 5 retrogenes
retro_mputfur_1093, retro_mputfur_1357, retro_mputfur_442, retro_mputfur_667, retro_mputfur_997,
Mus musculus ENSMUSG00000020857 within_species_paralog 1 retrogene
retro_mmus_221,
Mus musculus ENSMUSG00000024177 within_species_paralog 1 retrogene
retro_mmus_309,
Mus musculus ENSMUSG00000032478 other_paralog 1 retrogene
retro_mmus_2376,
Nomascus leucogenys ENSNLEG00000007919 possible_ortholog 2 retrogenes
retro_nleu_1029, retro_nleu_1030,
Oryctolagus cuniculus ENSOCUG00000022135 possible_ortholog 1 retrogene
retro_ocun_1728,
Pan troglodytes ENSPTRG00000009415 possible_ortholog 1 retrogene
retro_ptro_91,
Rattus norvegicus ENSRNOG00000002693 possible_ortholog 3 retrogenes
retro_rnor_1198, retro_rnor_1600, retro_rnor_704,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_581 96.75 57.68
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2. retro_mmus_2712 96.10 57.68
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3. retro_mmus_3081 72.34 52.43
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Download FASTA sequences of all ENSMUSG00000091228 retrocopies