Parental gene:

Psma5, ENSMUSG00000068749

Aliases:Psma5, ZETA
Description:proteasome (prosome, macropain) subunit, alpha type 5 [Source:MGI Symbol;Acc:MGI:1347009]
Organism:Mouse (Mus musculus)
Coordinates:3:108256925..108279974(+)


>ENSMUSG00000068749
ATGTTCCTCACTCGGTCCGAGTACGACAGGGGTGTGAATACTTTTTCTCCTGAAGGAAGATTATTTCAAGTGGAATATGC
CATTGAGGCTATCAAGCTTGGTTCTACAGCCATTGGCATCCAGACCTCAGAGGGTGTATGTCTAGCTGTGGAGAAGAGAA
TTACCTCCCCACTAATGGAGCCTAGCAGCATTGAGAAGATTGTAGAGATCGATGCTCATATAGGTTGTGCCATGAGTGGG
CTAATTGCTGATGCTAAAACTTTAATTGATAAAGCCAGAGTGGAGACACAGAACCACTGGTTCACCTATAATGAGACAAT
GACAGTTGAGAGTGTGACCCAGGCTGTGTCCAATCTGGCTCTGCAGTTTGGAGAAGAAGATGCAGATCCAGGTGCTATGT
CTCGTCCCTTTGGAGTAGCATTGTTGTTTGGAGGAGTTGATGAGAAAGGACCCCAACTGTTTCACATGGACCCATCTGGG
ACCTTTGTACAGTGTGATGCTCGAGCAATTGGCTCTGCTTCTGAGGGTGCCCAGAGCTCCTTGCAAGAAGTTTACCATAA
GTCTATGACTCTGAAGGAGGCCATCAAGTCCTCGCTCATCATCCTCAAGCAAGTCATGGAGGAGAAGCTGAATGCAACCA
ACATCGAGCTAGCCACGGTGCAGCCTGGTCAGAATTTCCACATGTTCACAAAGGAAGAACTGGAGGAGGTGATCAAGGAC
ATTTAA

Library Parental gene expression (RPM)
SRP007412_brain 24 .88 RPM
SRP007412_cerebellum 15 .81 RPM
SRP007412_heart 14 .35 RPM
SRP007412_kidney 18 .94 RPM
SRP007412_liver 20 .04 RPM
SRP007412_testis 14 .36 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000013670 ortholog_one2many 1 retrogene
retro_cpor_1063,
Equus caballus ENSECAG00000011835 ortholog_one2many 1 retrogene
retro_ecab_1106,
Echinops telfairi ENSETEG00000012916 ortholog_one2many 1 retrogene
retro_etel_1053,
Myotis lucifugus ENSMLUG00000008497 possible_ortholog 2 retrogenes
retro_mluc_1002, retro_mluc_926,
Mustela putorius furo ENSMPUG00000003189 possible_ortholog 1 retrogene
retro_mputfur_1295,
Otolemur garnettii ENSOGAG00000013560 possible_ortholog 1 retrogene
retro_ogar_3137,
Ochotona princeps ENSOPRG00000008863 ortholog_one2many 1 retrogene
retro_opri_449,
Pteropus vampyrus ENSPVAG00000008908 possible_ortholog 1 retrogene
retro_pvam_222,
Rattus norvegicus ENSRNOG00000019868 ortholog_one2many 2 retrogenes
retro_rnor_1230, retro_rnor_658,
Sus scrofa ENSSSCG00000006830 ortholog_one2many 2 retrogenes
retro_sscr_1156, retro_sscr_1194,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_52 98.34 100.00
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Download FASTA sequences of all ENSMUSG00000068749 retrocopies