Parental gene:

Phb, ENSMUSG00000038845

Aliases:Phb, Bap32
Description:prohibitin [Source:MGI Symbol;Acc:MGI:97572]
Organism:Mouse (Mus musculus)
Coordinates:11:95666956..95680773(+)


>ENSMUSG00000038845
ATGGCTGCCAAAGTGTTTGAGTCCATTGGAAAGTTCGGCCTGGCGTTGGCAGTTGCAGGAGGCGTGGTGAACTCTGCTTT
GTATAATGTGGATGCTGGACACAGAGCTGTCATCTTTGACCGATTCCGTGGCGTACAGGACATTGTGGTCGGGGAAGGGA
CTCATTTCCTCATCCCTTGGGTACAGAAACCAATTATCTTTGACTGCCGCTCTCGACCACGGAACGTACCAGTCATCACT
GGTAGCAAAGACTTGCAGAACGTCAATATCACACTGCGAATCCTCTTCCGGCCGGTGGCCAGCCAGCTTCCTCGTATCTA
CACCAGCATTGGCGAGGACTATGATGAGCGGGTCCTGCCTTCTATCACCACAGAGATCCTCAAGTCGGTGGTGGCTCGAT
TCGATGCTGGAGAATTGATTACCCAGCGAGAGCTGGTCTCCAGGCAGGTGAGCGATGACCTCACAGAGCGAGCGGCAACA
TTTGGGCTTATCCTGGATGACGTGTCCCTGACACATCTGACCTTCGGGAAGGAGTTCACAGAGGCAGTAGAAGCCAAACA
GGTGGCTCAGCAGGAAGCGGAGAGAGCCAGATTTGTGGTGGAAAAGGCTGAGCAGCAGAAGAAGGCAGCCATCATCTCTG
CTGAGGGTGACTCCAAGGCCGCTGAGCTGATCGCCAACTCGCTGGCCACGGCAGGCGACGGCCTGATCGAGCTGCGGAAG
CTGGAGGCCGCCGAGGACATTGCGTACCAGCTCTCCCGCTCTCGGAACATCACCTACCTGCCAGCGGGCCAGTCCGTGCT
TCTCCAGCTTCCCCAGTGA

Library Parental gene expression (RPM)
SRP007412_brain 17 .43 RPM
SRP007412_cerebellum 19 .89 RPM
SRP007412_heart 63 .66 RPM
SRP007412_kidney 43 .68 RPM
SRP007412_liver 25 .48 RPM
SRP007412_testis 2 .88 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000004797 ortholog_one2one 1 retrogene
retro_acar_49,
Canis familiaris ENSCAFG00000016926 possible_ortholog 1 retrogene
retro_cfam_202,
Choloepus hoffmanni ENSCHOG00000007588 possible_ortholog 2 retrogenes
retro_chof_1159, retro_chof_2193,
Callithrix jacchus ENSCJAG00000007174 possible_ortholog 22 retrogenes
retro_cjac_1048, retro_cjac_1403, retro_cjac_1683, retro_cjac_1761, retro_cjac_1820, retro_cjac_2261, retro_cjac_2389, retro_cjac_2390, retro_cjac_2391, retro_cjac_2445, retro_cjac_2523, retro_cjac_2659, retro_cjac_2663, retro_cjac_2909, retro_cjac_4205, retro_cjac_570, retro_cjac_635, retro_cjac_662, retro_cjac_872, retro_cjac_937, retro_cjac_966, retro_cjac_980,
Erinaceus europaeus ENSEEUG00000006481 ortholog_one2one 3 retrogenes
retro_eeur_219, retro_eeur_285, retro_eeur_369,
Gorilla gorilla ENSGGOG00000028002 possible_ortholog 12 retrogenes
retro_ggor_124, retro_ggor_1722, retro_ggor_1876, retro_ggor_238, retro_ggor_2387, retro_ggor_246, retro_ggor_2607, retro_ggor_3053, retro_ggor_476, retro_ggor_643, retro_ggor_741, retro_ggor_870,
Macropus eugenii ENSMEUG00000005122 ortholog_one2one 1 retrogene
retro_meug_708,
Myotis lucifugus ENSMLUG00000008203 possible_ortholog 2 retrogenes
retro_mluc_116, retro_mluc_2190,
Macaca mulatta ENSMMUG00000000156 possible_ortholog 13 retrogenes
retro_mmul_1096, retro_mmul_1119, retro_mmul_1165, retro_mmul_1425, retro_mmul_151, retro_mmul_1565, retro_mmul_2148, retro_mmul_2420, retro_mmul_426, retro_mmul_521, retro_mmul_834, retro_mmul_866, retro_mmul_933,
Monodelphis domestica ENSMODG00000012210 ortholog_one2one 1 retrogene
retro_mdom_812,
Otolemur garnettii ENSOGAG00000027015 possible_ortholog 1 retrogene
retro_ogar_968,
Procavia capensis ENSPCAG00000008851 ortholog_one2one 1 retrogene
retro_pcap_74,
Rattus norvegicus ENSRNOG00000046799 ortholog_one2one 18 retrogenes
retro_rnor_1058, retro_rnor_1416, retro_rnor_1540, retro_rnor_1542, retro_rnor_2398, retro_rnor_2399, retro_rnor_2610, retro_rnor_2653, retro_rnor_2815, retro_rnor_2826, retro_rnor_2848, retro_rnor_2855, retro_rnor_2909, retro_rnor_292, retro_rnor_2948, retro_rnor_2949, retro_rnor_543, retro_rnor_898,
Tursiops truncatus ENSTTRG00000010836 ortholog_one2one 1 retrogene
retro_ttru_639,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_822 93.36 99.63
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2. retro_mmus_1089 87.63 70.59
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3. retro_mmus_1321 100.00 100.00
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4. retro_mmus_3522 90.80 91.54
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5. retro_mmus_3530 75.55 100.00
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6. retro_mmus_3535 79.91 86.03
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7. retro_mmus_3649 85.35 100.00
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8. retro_mmus_3657 74.44 81.99
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Download FASTA sequences of all ENSMUSG00000038845 retrocopies