Parental gene: | Vps4a, ENSMUSG00000031913 |
| Aliases: | Vps4a, 4930589C15Rik, AI325971, AW553189 |
| Description: | vacuolar protein sorting 4a (yeast) [Source:MGI Symbol;Acc:MGI:1890520] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 8:107031221..107045755(+) |
>ENSMUSG00000031913
ATGACAACGTCAACCCTCCAGAAAGCCATCGATCTGGTGACAAAAGCCACAGAAGAGGATAAAGCCAAGAACTACGAGGA
GGCACTCCGTCTCTACCAGCATGCTGTGGAGTATTTCCTCCACGCCATCAAATATGAAGCACACAGTGACAAGGCCAAGG
AGAGCATTCGAGCAAAGTGCATGCAGTACCTAGACAGAGCGGAGAAGCTGAAGGATTATTTACGAAACAAAGAGAAACAT
GGCAAGAAGCCAGTCAAAGAGAACCAGAGTGAAGGCAAGGGTAGTGACAGTGACAGTGAAGGGGATAATCCAGAGAAAAA
GAAGTTACAAGAACAATTGATGGGTGCTGTTGTGATGGAGAAGCCGAACATACGGTGGAATGATGTAGCTGGACTGGAGG
GGGCTAAAGAGGCTCTCAAAGAAGCTGTGATTTTGCCAATTAAATTCCCACACTTATTCACAGGCAAACGCACTCCTTGG
CGAGGCATACTCCTCTTTGGGCCCCCAGGCACAGGCAAGTCCTACCTGGCCAAAGCCGTGGCAACAGAAGCCAACAACTC
TACCTTCTTCTCTGTGTCCTCCTCGGATCTGATGTCTAAGTGGTTGGGGGAAAGCGAGAAGCTAGTCAAGAACCTGTTTG
AGCTGGCCCGGCAGCATAAGCCTTCCATCATCTTCATTGATGAGGTAGATTCCCTCTGTGGGTCACGGAATGAAAATGAG
AGTGAAGCCGCTCGTAGGATCAAAACAGAGTTCTTGGTCCAGATGCAAGGAGTGGGGAATAATAATGATGGAACTCTTGT
TCTTGGTGCCACAAACATCCCCTGGGTGTTGGATTCAGCCATCAGGAGGAGGTTTGAAAAGCGAATTTATATCCCATTGC
CAGAGGAAGCGGCCCGTGCCCAAATGTTTCGGTTACATCTGGGAAGCACACCTCACAACCTCACAGATGCTAACATTCAC
GAGCTGGCCCGCAAGACAGAAGGCTACTCAGGAGCAGATATCAGCATCATTGTGCGGGACTCCCTCATGCAGCCAGTCAG
AAAAGTACAGTCAGCAACACACTTCAAGAAGGTGTGTGGCCCTTCTCGAACCAACCCTAGCGTTATGATTGATGATCTTC
TGACCCCATGTTCTCCGGGAGATCCAGGGGCCATAGAGATGACTTGGATGGATGTCCCTGGTGATAAACTCTTAGAGCCT
GTGGTTTGCATGTCTGACATGCTCCGGTCTTTGGCCACTACCCGGCCCACAGTGAATGCAGACGACCTCCTGAAAGTAAA
GAAATTCTCTGAGGACTTTGGACAGGAGAGTTAA
ATGACAACGTCAACCCTCCAGAAAGCCATCGATCTGGTGACAAAAGCCACAGAAGAGGATAAAGCCAAGAACTACGAGGA
GGCACTCCGTCTCTACCAGCATGCTGTGGAGTATTTCCTCCACGCCATCAAATATGAAGCACACAGTGACAAGGCCAAGG
AGAGCATTCGAGCAAAGTGCATGCAGTACCTAGACAGAGCGGAGAAGCTGAAGGATTATTTACGAAACAAAGAGAAACAT
GGCAAGAAGCCAGTCAAAGAGAACCAGAGTGAAGGCAAGGGTAGTGACAGTGACAGTGAAGGGGATAATCCAGAGAAAAA
GAAGTTACAAGAACAATTGATGGGTGCTGTTGTGATGGAGAAGCCGAACATACGGTGGAATGATGTAGCTGGACTGGAGG
GGGCTAAAGAGGCTCTCAAAGAAGCTGTGATTTTGCCAATTAAATTCCCACACTTATTCACAGGCAAACGCACTCCTTGG
CGAGGCATACTCCTCTTTGGGCCCCCAGGCACAGGCAAGTCCTACCTGGCCAAAGCCGTGGCAACAGAAGCCAACAACTC
TACCTTCTTCTCTGTGTCCTCCTCGGATCTGATGTCTAAGTGGTTGGGGGAAAGCGAGAAGCTAGTCAAGAACCTGTTTG
AGCTGGCCCGGCAGCATAAGCCTTCCATCATCTTCATTGATGAGGTAGATTCCCTCTGTGGGTCACGGAATGAAAATGAG
AGTGAAGCCGCTCGTAGGATCAAAACAGAGTTCTTGGTCCAGATGCAAGGAGTGGGGAATAATAATGATGGAACTCTTGT
TCTTGGTGCCACAAACATCCCCTGGGTGTTGGATTCAGCCATCAGGAGGAGGTTTGAAAAGCGAATTTATATCCCATTGC
CAGAGGAAGCGGCCCGTGCCCAAATGTTTCGGTTACATCTGGGAAGCACACCTCACAACCTCACAGATGCTAACATTCAC
GAGCTGGCCCGCAAGACAGAAGGCTACTCAGGAGCAGATATCAGCATCATTGTGCGGGACTCCCTCATGCAGCCAGTCAG
AAAAGTACAGTCAGCAACACACTTCAAGAAGGTGTGTGGCCCTTCTCGAACCAACCCTAGCGTTATGATTGATGATCTTC
TGACCCCATGTTCTCCGGGAGATCCAGGGGCCATAGAGATGACTTGGATGGATGTCCCTGGTGATAAACTCTTAGAGCCT
GTGGTTTGCATGTCTGACATGCTCCGGTCTTTGGCCACTACCCGGCCCACAGTGAATGCAGACGACCTCCTGAAAGTAAA
GAAATTCTCTGAGGACTTTGGACAGGAGAGTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 81 .98 RPM |
| SRP007412_cerebellum | 94 .31 RPM |
| SRP007412_heart | 59 .93 RPM |
| SRP007412_kidney | 61 .98 RPM |
| SRP007412_liver | 25 .89 RPM |
| SRP007412_testis | 181 .35 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Macropus eugenii | ENSMEUG00000007309 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000006550 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000009907 | within_species_paralog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000016975 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000012535 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_1038 | 82.89 | 94.28 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000031913 retrocopies