Parental gene: | Mrpl48, ENSMUSG00000030706 |
| Aliases: | None |
| Description: | mitochondrial ribosomal protein L48 [Source:MGI Symbol;Acc:MGI:1289321] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 7:100545750..100608297(-) |
>ENSMUSG00000030706
ATGAGCGGAACCCTGGGAAAGGTGCTGGGTGTGTGGACCAATACTGTTTCTAAGCAAGGCTTTTCCCTCCTAAGGTTCAG
AAGTTTGGGAGAGAATCCCATTTTTTCTGCAGGTGGTATTCTGTGGACCAGTCGGCACTACAAGACAAAGCCCACTCGTG
GCATCGGAAGATACAGACACTTGGTGAAAGTGCAGGAGCCCAAAAAGAAGAAAGCAAAAGTAGAACTGAGAGCCATTAAT
GTGGGGACAGATTATGAATATGGGGTTTTAAACATCCACCTGACAGCATATGACATGAGTCTGGCAGAAAGTTATGCCCA
GTATGTCCACCGCCTCTGCAACCGGCTGTCCATCAAAGTCGAGGAAAGCTATGCGATGCCTACCAAAACCATGGAAGTGA
TGCGACTGCCAGACCAAGGCAACAAAATGGTCCTAGACTCCATCCTTACCACCCATGAGCGAGTGGTGCAGATCAGCGGT
CTGAGTGCTACATTTGCAGAGATTTTCTTGGAAGTACTCCAAAGCAATCTTCCAGAAGGAGTCAGATTGTCCGTGAGGGA
GCACACTGAAGAAGACTTCAAGGGAAGGTTCAAAGCTCGGCCGGAACTGGAAGAGTTGTTGGCCAAGTTGAACTAA
ATGAGCGGAACCCTGGGAAAGGTGCTGGGTGTGTGGACCAATACTGTTTCTAAGCAAGGCTTTTCCCTCCTAAGGTTCAG
AAGTTTGGGAGAGAATCCCATTTTTTCTGCAGGTGGTATTCTGTGGACCAGTCGGCACTACAAGACAAAGCCCACTCGTG
GCATCGGAAGATACAGACACTTGGTGAAAGTGCAGGAGCCCAAAAAGAAGAAAGCAAAAGTAGAACTGAGAGCCATTAAT
GTGGGGACAGATTATGAATATGGGGTTTTAAACATCCACCTGACAGCATATGACATGAGTCTGGCAGAAAGTTATGCCCA
GTATGTCCACCGCCTCTGCAACCGGCTGTCCATCAAAGTCGAGGAAAGCTATGCGATGCCTACCAAAACCATGGAAGTGA
TGCGACTGCCAGACCAAGGCAACAAAATGGTCCTAGACTCCATCCTTACCACCCATGAGCGAGTGGTGCAGATCAGCGGT
CTGAGTGCTACATTTGCAGAGATTTTCTTGGAAGTACTCCAAAGCAATCTTCCAGAAGGAGTCAGATTGTCCGTGAGGGA
GCACACTGAAGAAGACTTCAAGGGAAGGTTCAAAGCTCGGCCGGAACTGGAAGAGTTGTTGGCCAAGTTGAACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 26 .68 RPM |
| SRP007412_cerebellum | 25 .05 RPM |
| SRP007412_heart | 26 .71 RPM |
| SRP007412_kidney | 18 .19 RPM |
| SRP007412_liver | 12 .26 RPM |
| SRP007412_testis | 12 .30 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000005585 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000175581 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000009716 | possible_ortholog | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000017097 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000009302 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000004771 | ortholog_one2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000004049 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000005403 | ortholog_one2one | 2 retrogenes | |
| Vicugna pacos | ENSVPAG00000004657 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_563 | 77.20 | 91.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_2478 | 97.63 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000030706 retrocopies