Parental gene:

ENSCAFG00000005585

Aliases:None
Description:None
Organism:Dog (Canis familiaris)
Coordinates:21:24391772..24456253(-)


>ENSCAFG00000005585
TTAGGTGGCATTCTGCTGAATACCAGTCGGCACTACAAGTCAAAGCCTACCCATGGCATTGGAAGATACAAGCACCTAGT
TAAAGCACAGGAGCCCAAGAAGAAGAAGGGAAAAGTAGAAGTGAGACCCATTAATTTGGGGACAGATTATGAATATGGAG
TTTTAAACATTCACCTGACTGCATACGACATGGCCCTAGCAGAAAGTTATGCCCAATATGTTCACCACCTCTGCAACCAT
CTATCCATTAAAGTTGAGGAAAGTTATGCAATGCCCACCAAAACCATGGAAGTGTTGCGGCTGCAGGACCAAGGTAACAA
AATGCTCCTGGACTCAGTTCTTACCACTCATGAACGAGTGGTTCAGATCAGTGGTTTGAGTGCTACATTTGCAGAGATTT
TCTTGGAAATAATCCAAAGCAATCTTCCTGAAGGAGTCAGATTGTCAGTGAAGGAGCACACTGAAGAAGACTTCAAGGGA
AGATTCAAAGCTCGGCCAGAACTGGAAGAACTGTTGGCCAAGTTGAACTAG

Library Parental gene expression (RPM)
SRP017611_brain 8 .81 RPM
SRP017611_kidney 20 .93 RPM
SRP017611_liver 4 .42 RPM
SRP012049_cerebellum 7 .90 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000003662 possible_ortholog 1 retrogene
retro_chof_2664,
Homo sapiens ENSG00000175581 ortholog_one2many 1 retrogene
retro_hsap_3557,
Mustela putorius furo ENSMPUG00000009716 possible_ortholog 1 retrogene
retro_mputfur_38,
Mus musculus ENSMUSG00000030706 ortholog_one2many 2 retrogenes
retro_mmus_2478, retro_mmus_563,
Nomascus leucogenys ENSNLEG00000017097 ortholog_one2many 1 retrogene
retro_nleu_1376,
Oryctolagus cuniculus ENSOCUG00000009302 ortholog_many2many 1 retrogene
retro_ocun_39,
Otolemur garnettii ENSOGAG00000004771 ortholog_many2many 1 retrogene
retro_ogar_234,
Pan troglodytes ENSPTRG00000004049 ortholog_one2many 1 retrogene
retro_ptro_2417,
Tursiops truncatus ENSTTRG00000005403 ortholog_one2many 2 retrogenes
retro_ttru_1123, retro_ttru_297,
Vicugna pacos ENSVPAG00000004657 ortholog_one2many 1 retrogene
retro_vpac_538,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_1437 86.72 64.00
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Download FASTA sequences of all ENSCAFG00000005585 retrocopies