Parental gene: | Sec13, ENSMUSG00000030298 |
| Aliases: | Sec13, 1110003H02Rik, Sec13l1, Sec13r |
| Description: | SEC13 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:99832] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 6:113728066..113740743(-) |
>ENSMUSG00000030298
ATGGTGTCAGTAATGAACACTGTGGACACCTCTCATGAGGACATGATTCATGATGCACAGATGGACTACTACGGCACCCG
CCTAGCAACCTGCTCCTCGGATAGGTCCGTCAAAATTTTCGATGTGCGGAATGGAGGGCAGATCCTCATCGCAGACCTCA
GAGGACATGAGGGGCCAGTATGGCAAGTGGCCTGGGCCCACCCCATGTATGGCAATATCCTGGCCTCCTGTTCCTATGAC
CGGAAAGTCATCATCTGGAAGGAGGAAAACGGCACTTGGGAGAAGACCCATGAGCACTCGGGACACGACTCCTCAGTGAA
CTCTGTTTGCTGGGCCCCTCATGACTATGGCCTGATCCTGGCCTGTGGGAGTTCAGATGGGGCCATCTCACTGCTGACCT
ATACAGGGGAAGGCCAGTGGGAAGTGAAGAAGATTAACAATGCTCACACGATTGGCTGTAATGCTGTCAGTTGGGCCCCA
GCAGTTGTGCCTGGAAGCCTTATAGACCAACCATCAGGGCAGAAACCCAATTACATCAAGAAGTTTGCATCAGGTGGCTG
TGACAACCTCATCAAGCTATGGAGGGAAGAGGAGGATGGCCAGTGGAAGGAGGAGCAGAAGCTAGAGGCACACAGCGACT
GGGTCCGAGATGTTGCCTGGGCCCCCTCCATTGGCTTGCCCACCAGCACCATTGCCAGCTGCTCTCAGGATGGTCGAGTG
TTTATTTGGACCTGTGACGATGCCTCAGGCAATATGTGGTCACCTAAACTCCTACACAAGTTCAATGATGTTGTGTGGCA
CGTGAGCTGGTCCATCACAGCCAACATCCTGGCTGTGTCAGGTGGAGACAATAAGGTGACCCTGTGGAAAGAGTCGGTGG
ACGGACAGTGGGTGTGCATCAGTGACGTCAACAAGGGCCAGGGTTCTGTGTCAGCCTCCATCACAGAGGGCCAACAGAAC
GAGCAGTGA
ATGGTGTCAGTAATGAACACTGTGGACACCTCTCATGAGGACATGATTCATGATGCACAGATGGACTACTACGGCACCCG
CCTAGCAACCTGCTCCTCGGATAGGTCCGTCAAAATTTTCGATGTGCGGAATGGAGGGCAGATCCTCATCGCAGACCTCA
GAGGACATGAGGGGCCAGTATGGCAAGTGGCCTGGGCCCACCCCATGTATGGCAATATCCTGGCCTCCTGTTCCTATGAC
CGGAAAGTCATCATCTGGAAGGAGGAAAACGGCACTTGGGAGAAGACCCATGAGCACTCGGGACACGACTCCTCAGTGAA
CTCTGTTTGCTGGGCCCCTCATGACTATGGCCTGATCCTGGCCTGTGGGAGTTCAGATGGGGCCATCTCACTGCTGACCT
ATACAGGGGAAGGCCAGTGGGAAGTGAAGAAGATTAACAATGCTCACACGATTGGCTGTAATGCTGTCAGTTGGGCCCCA
GCAGTTGTGCCTGGAAGCCTTATAGACCAACCATCAGGGCAGAAACCCAATTACATCAAGAAGTTTGCATCAGGTGGCTG
TGACAACCTCATCAAGCTATGGAGGGAAGAGGAGGATGGCCAGTGGAAGGAGGAGCAGAAGCTAGAGGCACACAGCGACT
GGGTCCGAGATGTTGCCTGGGCCCCCTCCATTGGCTTGCCCACCAGCACCATTGCCAGCTGCTCTCAGGATGGTCGAGTG
TTTATTTGGACCTGTGACGATGCCTCAGGCAATATGTGGTCACCTAAACTCCTACACAAGTTCAATGATGTTGTGTGGCA
CGTGAGCTGGTCCATCACAGCCAACATCCTGGCTGTGTCAGGTGGAGACAATAAGGTGACCCTGTGGAAAGAGTCGGTGG
ACGGACAGTGGGTGTGCATCAGTGACGTCAACAAGGGCCAGGGTTCTGTGTCAGCCTCCATCACAGAGGGCCAACAGAAC
GAGCAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 35 .72 RPM |
| SRP007412_cerebellum | 32 .22 RPM |
| SRP007412_heart | 40 .28 RPM |
| SRP007412_kidney | 53 .05 RPM |
| SRP007412_liver | 39 .38 RPM |
| SRP007412_testis | 46 .06 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000005118 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000016439 | ortholog_one2one | 2 retrogenes | |
| Felis catus | ENSFCAG00000011245 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000157020 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000002401 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000004482 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000017050 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000013658 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000014619 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000010628 | ortholog_one2many | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000004395 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_2159 | 83.94 | 67.08 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_3443 | 75.97 | 86.02 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000030298 retrocopies