Parental gene:

Nudc, ENSMUSG00000028851

Aliases:Nudc, SIG-92, Silg92
Description:nuclear distribution gene C homolog (Aspergillus) [Source:MGI Symbol;Acc:MGI:106014]
Organism:Mouse (Mus musculus)
Coordinates:4:133532541..133545996(-)


>ENSMUSG00000028851
ATGGGAGGGGAGCAGGAGGAGGAGCGCTTCGACGGCATGCTGCTGGCCATGGCGCAGCAGCACGAGGGCGGCGTGCAGGA
GCTTGTGAACACCTTCTTCAGCTTCCTTCGACGCAAAACAGACTTTTTCATTGGAGGAGAAGAGGGGATGGCAGAGAAGC
TGATCACACAGACTTTCAACCACCACAACCAGCTGGCACAGAAGGCCCGGAGAGAGAAGCGAGCTCGGCAGGAGACCGAG
CGCAGGGAGAAGGCAGAGCGGGCAGCCAGGCTGGCCAAGGAGGCCAAGGCAGAGACCCCGGGGCCACAGATCAAGGAGTT
GACTGATGAGGAGGCAGAGCGACTGCAACTGGAGATTGACCAGAAAAAGGATGCAGAGGATCAGGAGGCCCAGCTCAAGA
ACGGCAGCCTTGACTCACCAGGAAAGCAGGATGCGGAGGACGAGGAGGACGAGGAGGATGAGAAGGACAAAGGAAAGCTG
AAGCCCAACCTAGGCAATGGGGCTGACCTGCCCAACTACCGCTGGACCCAGACCCTGGCAGAACTGGATCTGGCAGTGCC
CTTCCGGGTCAGCTTCCGGCTGAAGGGAAAGGATGTGGTGGTGGACATCCAGCGGCGGCATCTCCGGGTGGGCCTTAAAG
GACAGCCACCAGTGGTTGATGGAGAACTCTACAATGAAGTCAAGGTGGAGGAGAGCTCGTGGCTCATCGAGGATGGCAAG
GTGGTGACAGTGCATCTGGAGAAGATCAATAAGATGGAATGGTGGAACCGCTTGGTTACCAGTGACCCCGAAATCAATAC
CAAGAAGATTAACCCTGAGAACTCCAAGCTATCAGACCTCGACAGTGAGACTCGCAGCATGGTGGAAAAGATGATGTATG
ACCAGAGGCAGAAGTCCATGGGCTTGCCCACCTCTGATGAGCAGAAGAAACAGGAAATCCTGAAGAAGTTCATGGACCAG
CACCCAGAGATGGATTTCTCCAAGGCCAAATTCAACTAG

Library Parental gene expression (RPM)
SRP007412_brain 64 .53 RPM
SRP007412_cerebellum 98 .70 RPM
SRP007412_heart 60 .64 RPM
SRP007412_kidney 75 .90 RPM
SRP007412_liver 54 .18 RPM
SRP007412_testis 90 .88 RPM



Species Parental gene accession Homology type Retrogenes number
Erinaceus europaeus ENSEEUG00000001291 ortholog_one2one 1 retrogene
retro_eeur_526,
Homo sapiens ENSG00000090273 ortholog_one2one 2 retrogenes
retro_hsap_2168, retro_hsap_2183,
Gorilla gorilla ENSGGOG00000015314 ortholog_one2one 2 retrogenes
retro_ggor_1720, retro_ggor_1730,
Microcebus murinus ENSMICG00000015671 ortholog_one2one 1 retrogene
retro_mmur_457,
Nomascus leucogenys ENSNLEG00000009404 ortholog_one2one 2 retrogenes
retro_nleu_2545, retro_nleu_312,
Pongo abelii ENSPPYG00000001673 ortholog_one2one 2 retrogenes
retro_pabe_2055, retro_pabe_2064,
Pan troglodytes ENSPTRG00000000395 ortholog_one2one 2 retrogenes
retro_ptro_1655, retro_ptro_1661,
Pteropus vampyrus ENSPVAG00000004408 ortholog_one2one 1 retrogene
retro_pvam_434,
Rattus norvegicus ENSRNOG00000007399 ortholog_one2many 2 retrogenes
retro_rnor_2009, retro_rnor_2108,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_3181 98.87 53.01
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Download FASTA sequences of all ENSMUSG00000028851 retrocopies