Parental gene: | Atpaf1, ENSMUSG00000028710 |
| Aliases: | Atpaf1, 6330547J17Rik, AI593252, ATP11, ATP11p |
| Description: | ATP synthase mitochondrial F1 complex assembly factor 1 [Source:MGI Symbol;Acc:MGI:2180560] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 4:115784811..115818828(+) |
>ENSMUSG00000028710
ATGGAGCAGGCGCGCGGGCCGGGGGCCGAGGCTGACGCGCCCGAGGAGGAGGAGGGGGAGTCGCAGGCGGCCATGGCGGC
GGTAGTGTCCGCTGCGGGTGGAGCGTGCCCCGCAGTCCTGCAGGTGGCGGGTCTCTACCGAGGCCTGTGTGCAGTGCGCA
GCCGCGCCCTGGGGCTGGGGTTCGTGTCACCGGCACAGTTGCGCGTGTTCCCGGTGCGCCGGGGCTCGGGCCTGCCCCCC
GAGGGAGCAGACGGCAGTGGGGTCAGCGAGCTGGAAGCGAACCCCTTCTACGACCGCTACCGGGACAAGATCCAGCAGCT
GCGCAGGTCTGACCCAGCGGCCTTTGAGTCCCGCCTGGAGAAGCGCAGTGAGTTCCGAAAGCAGCCAGTGGGGCACTCCA
AACAAAGTGATTTTATCAAGTGTATGGAGCAGAAGACAGATGCCTTGGGGAAACAGCCTGTGAGCAAAGGATTCACTAAG
GACAAGACTCTCAGTTCAGTCTTCAACGTTGAGATGGTGAAAGACAAAACTGCGGAGGAAATAAAACAGATTTGGCAGCA
GTATTTTTCAGCAAAAGACACAGTCTACGCAGTTATTCCTAAAGAGAAGTTTGATTTGATCTGGAACAGGGCTCAGTCCT
GCCCAACATTTCTTTGTGCACTACCAAGAAGGGATGGTTATGAGTTCTTTGTAGGACAATGGACAGGTACAGAGCTCCAC
TTCACTGCACTTATAAATATTCAGACCCGAGGGGATGCAGCAGCCAGCCAGCTGATTTTATATCACTATCCTGAACTTAA
GGAAGAAAAGGGCATAGTGCTGATGACAGCAGAAATGGACTCCACATTTCTGAATGTTGTGGAGGCACAGTGCATCGCCA
ATCAGGTTCAGCTCTTCTACGCCACCGATCGGAAGGAGATCTATGGGCTAGTAGAGACCTTTAACTTCAGACCAAATGAG
TTCAAATATATGTCTGTCATCGCTGAGTTGGAGCAAAGTGGACTTGGAGCCGAACTGAAACGTGCCCAGAACCAAGATAA
GACTTAG
ATGGAGCAGGCGCGCGGGCCGGGGGCCGAGGCTGACGCGCCCGAGGAGGAGGAGGGGGAGTCGCAGGCGGCCATGGCGGC
GGTAGTGTCCGCTGCGGGTGGAGCGTGCCCCGCAGTCCTGCAGGTGGCGGGTCTCTACCGAGGCCTGTGTGCAGTGCGCA
GCCGCGCCCTGGGGCTGGGGTTCGTGTCACCGGCACAGTTGCGCGTGTTCCCGGTGCGCCGGGGCTCGGGCCTGCCCCCC
GAGGGAGCAGACGGCAGTGGGGTCAGCGAGCTGGAAGCGAACCCCTTCTACGACCGCTACCGGGACAAGATCCAGCAGCT
GCGCAGGTCTGACCCAGCGGCCTTTGAGTCCCGCCTGGAGAAGCGCAGTGAGTTCCGAAAGCAGCCAGTGGGGCACTCCA
AACAAAGTGATTTTATCAAGTGTATGGAGCAGAAGACAGATGCCTTGGGGAAACAGCCTGTGAGCAAAGGATTCACTAAG
GACAAGACTCTCAGTTCAGTCTTCAACGTTGAGATGGTGAAAGACAAAACTGCGGAGGAAATAAAACAGATTTGGCAGCA
GTATTTTTCAGCAAAAGACACAGTCTACGCAGTTATTCCTAAAGAGAAGTTTGATTTGATCTGGAACAGGGCTCAGTCCT
GCCCAACATTTCTTTGTGCACTACCAAGAAGGGATGGTTATGAGTTCTTTGTAGGACAATGGACAGGTACAGAGCTCCAC
TTCACTGCACTTATAAATATTCAGACCCGAGGGGATGCAGCAGCCAGCCAGCTGATTTTATATCACTATCCTGAACTTAA
GGAAGAAAAGGGCATAGTGCTGATGACAGCAGAAATGGACTCCACATTTCTGAATGTTGTGGAGGCACAGTGCATCGCCA
ATCAGGTTCAGCTCTTCTACGCCACCGATCGGAAGGAGATCTATGGGCTAGTAGAGACCTTTAACTTCAGACCAAATGAG
TTCAAATATATGTCTGTCATCGCTGAGTTGGAGCAAAGTGGACTTGGAGCCGAACTGAAACGTGCCCAGAACCAAGATAA
GACTTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 12 .41 RPM |
| SRP007412_cerebellum | 9 .03 RPM |
| SRP007412_heart | 15 .69 RPM |
| SRP007412_kidney | 8 .43 RPM |
| SRP007412_liver | 2 .59 RPM |
| SRP007412_testis | 5 .49 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000000094 | ortholog_one2one | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000003349 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000012737 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_1982 | 100.00 | 80.46 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000028710 retrocopies