Parental gene: | ATPAF1, ENSBTAG00000000094 |
| Aliases: | None |
| Description: | None |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 3:100065496..100090042(+) |
>ENSBTAG00000000094
ATGGCTGCCGTGGTGGCGGCGGCGGGTGGCGCGGGCCCGGCCGTCTTGCAGGTGGCCGGCCTCTACCGCGGCCTATGCGC
AGTGCGCAGCCGCGCCCTGGGCCTGGGGCTCGTGTCAGCCGCGCAGCTGCGCGTGTTCCCGGTGCGCCGCAGCTCGGGCC
GGCCCGCCGGGGGAGCCGACGGCAGCGCGGTCGGGGACGAGCTCGAGGCCAACCCCTTCTACGACCGCTACCGCGACAAG
ATCCAGCAGTTGCGCAGGTCTGACCCAGCTGCTTTTGAGTCCAGACTGGAGAAGCGCAGTGAGTTTAGGAAGCAGCCAGT
GGGGCACTCCAGGCAAGGTGACTTTATTAAATGTGTGGAACAGAAGACACTGGGGAAACAGCCTGTGAGCAGAGGATTCA
CTAAGGACAAGACTCTCAGTTCAATCTTTAACATTGAGATGGTGAAAGGCAAAACTGCAGAAGAAATAAAACAGATTTGG
CAGCAGTATTTTGCAGCAAAAGATACAGTCTACGCAGTTATTCCTAAAGAAAAGTTTGATTTGATTTGGAACCGGGCTCA
GTCCTGCCCAACATTTCTCTGTGCACTACCAAGAAGGGAAGGTTATGAGTTTTTTGTCGGGCAATGGACAGGTACTGAAC
TCCACTTCACTGCACTTATAAATATTCAGACCCGAGGGGAAGCTGCGGCCAGCCAGCTGATTTTATATCACTACCCTGAA
CTTAAGGAAGAAAAGGGCATAGTGCTGATGACAGCAGAAATGGATTCCACATTTCTGAGTGTTGCTGAGGCACAGTGCAT
GGCCAACCAAGTGCAGCTCTTCTATGCCACTGATCGAAAAGAGACCTACGGGTTAGTGGAGACCTTTAACTTCAGACCGA
ATGAGTTCAAGTATATGTCTGTCATCGCTGAGTTGGAGCAAAGCGGACTTGGAGCCGAACTGAAATGTTCTCAGAACCAG
AATAAGACT
ATGGCTGCCGTGGTGGCGGCGGCGGGTGGCGCGGGCCCGGCCGTCTTGCAGGTGGCCGGCCTCTACCGCGGCCTATGCGC
AGTGCGCAGCCGCGCCCTGGGCCTGGGGCTCGTGTCAGCCGCGCAGCTGCGCGTGTTCCCGGTGCGCCGCAGCTCGGGCC
GGCCCGCCGGGGGAGCCGACGGCAGCGCGGTCGGGGACGAGCTCGAGGCCAACCCCTTCTACGACCGCTACCGCGACAAG
ATCCAGCAGTTGCGCAGGTCTGACCCAGCTGCTTTTGAGTCCAGACTGGAGAAGCGCAGTGAGTTTAGGAAGCAGCCAGT
GGGGCACTCCAGGCAAGGTGACTTTATTAAATGTGTGGAACAGAAGACACTGGGGAAACAGCCTGTGAGCAGAGGATTCA
CTAAGGACAAGACTCTCAGTTCAATCTTTAACATTGAGATGGTGAAAGGCAAAACTGCAGAAGAAATAAAACAGATTTGG
CAGCAGTATTTTGCAGCAAAAGATACAGTCTACGCAGTTATTCCTAAAGAAAAGTTTGATTTGATTTGGAACCGGGCTCA
GTCCTGCCCAACATTTCTCTGTGCACTACCAAGAAGGGAAGGTTATGAGTTTTTTGTCGGGCAATGGACAGGTACTGAAC
TCCACTTCACTGCACTTATAAATATTCAGACCCGAGGGGAAGCTGCGGCCAGCCAGCTGATTTTATATCACTACCCTGAA
CTTAAGGAAGAAAAGGGCATAGTGCTGATGACAGCAGAAATGGATTCCACATTTCTGAGTGTTGCTGAGGCACAGTGCAT
GGCCAACCAAGTGCAGCTCTTCTATGCCACTGATCGAAAAGAGACCTACGGGTTAGTGGAGACCTTTAACTTCAGACCGA
ATGAGTTCAAGTATATGTCTGTCATCGCTGAGTTGGAGCAAAGCGGACTTGGAGCCGAACTGAAATGTTCTCAGAACCAG
AATAAGACT
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 20 .42 RPM |
| SRP017611_kidney | 34 .44 RPM |
| SRP017611_liver | 23 .86 RPM |
| ERP005899_muscle | 15 .78 RPM |
| ERP005899_liver | 22 .49 RPM |
| SRP030211_testis | 50 .80 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000003349 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000012737 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000028710 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_1192 | 76.10 | 83.59 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000000094 retrocopies