Parental gene: | Ptma, ENSMUSG00000026238 |
| Aliases: | Ptma, Thym |
| Description: | prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 1:86526735..86530698(+) |
>ENSMUSG00000026238
ATGTCAGACGCGGCAGTGGATACCAGCTCCGAGATCACCACCAAGGACTTGAAGGAGAAGAAGGAAGTTGTGGAGGAGGC
AGAGAATGGAAGAGATGCACCTGCCAATGGGAACGCTCAAAATGAGGAAAATGGGGAGCAGGAGGCTGACAATGAGGTAG
ATGAAGAAGAGGAAGAAGGTGGGGAGGAAGAGGAGGAGGAGGAAGAAGGTGACGGTGAGGAGGAGGATGGAGATGAAGAT
GAGGAAGCTGAGGCTCCTACGGGCAAGCGGGTAGCTGAGGATGATGAGGATGACGATGTGGACACCAAGAAGCAGAAGAC
CGAGGAGGATGACTAG
ATGTCAGACGCGGCAGTGGATACCAGCTCCGAGATCACCACCAAGGACTTGAAGGAGAAGAAGGAAGTTGTGGAGGAGGC
AGAGAATGGAAGAGATGCACCTGCCAATGGGAACGCTCAAAATGAGGAAAATGGGGAGCAGGAGGCTGACAATGAGGTAG
ATGAAGAAGAGGAAGAAGGTGGGGAGGAAGAGGAGGAGGAGGAAGAAGGTGACGGTGAGGAGGAGGATGGAGATGAAGAT
GAGGAAGCTGAGGCTCCTACGGGCAAGCGGGTAGCTGAGGATGATGAGGATGACGATGTGGACACCAAGAAGCAGAAGAC
CGAGGAGGATGACTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 66 .05 RPM |
| SRP007412_cerebellum | 120 .54 RPM |
| SRP007412_heart | 97 .94 RPM |
| SRP007412_kidney | 233 .71 RPM |
| SRP007412_liver | 95 .06 RPM |
| SRP007412_testis | 65 .54 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000002549 | possible_ortholog | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000032596 | possible_ortholog | 4 retrogenes | |
| Callithrix jacchus | ENSCJAG00000013611 | possible_ortholog | 9 retrogenes | |
| Felis catus | ENSFCAG00000004780 | possible_ortholog | 1 retrogene | |
| Homo sapiens | ENSG00000187514 | possible_ortholog | 6 retrogenes | |
| Gorilla gorilla | ENSGGOG00000009874 | possible_ortholog | 4 retrogenes | |
| Myotis lucifugus | ENSMLUG00000002628 | possible_ortholog | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000012140 | possible_ortholog | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000014135 | possible_ortholog | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000018584 | ortholog_one2many | 1 retrogene | |
| Sus scrofa | ENSSSCG00000023690 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_55 | 83.00 | 88.29 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_414 | 51.61 | 53.15 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmus_3135 | 59.79 | 85.59 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mmus_3136 | 61.86 | 85.59 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000026238 retrocopies