Parental gene:

Lypla1, ENSMUSG00000025903

Aliases:Lypla1, Pla1a
Description:lysophospholipase 1 [Source:MGI Symbol;Acc:MGI:1344588]
Organism:Mouse (Mus musculus)
Coordinates:1:4807787..4886770(+)


>ENSMUSG00000025903
ATGTGCGGCAACAACATGTCCGCTCCGATGCCCGCCGTTGTGCCGGCCGCCCGGAAGGCCACCGCCGCGGTTATTTTCCT
TCACGGATTGGGAGATACAGGGCATGGATGGGCAGAAGCCTTTGCAGGTATCAAAAGTCCCCACATCAAATACATCTGTC
CACATGCCCCTGTGATGCCAGTCACATTAAATATGAATATGGCTATGCCTTCTTGGTTTGATATCGTTGGACTTTCACCA
GATTCCCAGGAAGATGAATCTGGAATTAAACAGGCAGCAGAAACCGTAAAAGCCTTGATAGATCAAGAAGTGAAGAATGG
CATTCCTTCTAACAGGATTATTTTGGGAGGATTTTCTCAGGGAGGCGCCTTGTCTTTATACACTGCTCTCACCACACAGC
AGAAACTGGCTGGTGTCACTGCACTCAGTTGCTGGCTTCCACTTCGGGCTTCGTTTTCACAGGGGCCGATCAACAGTGCT
AATCGAGATATTTCCGTTCTCCAGTGCCATGGAGATTGTGACCCTTTAGTTCCCCTAATGTTTGGTTCTCTTACTGTTGA
AAGACTAAAAGCATTGATAAATCCAGCCAATGTAACCTTCAAAATCTATGAAGGCATGATGCACAGCTCATGTCAGCAGG
AAATGATGGATGTCAAGCACTTCATTGATAAGCTCCTACCTCCAATTGATTGA

Library Parental gene expression (RPM)
SRP007412_brain 20 .07 RPM
SRP007412_cerebellum 17 .11 RPM
SRP007412_heart 35 .33 RPM
SRP007412_kidney 99 .71 RPM
SRP007412_liver 92 .03 RPM
SRP007412_testis 46 .61 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000006978 ortholog_one2one 1 retrogene
retro_cfam_523,
Equus caballus ENSECAG00000016530 ortholog_one2one 1 retrogene
retro_ecab_238,
Echinops telfairi ENSETEG00000001727 ortholog_one2one 2 retrogenes
retro_etel_612, retro_etel_791,
Myotis lucifugus ENSMLUG00000008208 ortholog_one2many 1 retrogene
retro_mluc_1683,
Macaca mulatta ENSMMUG00000013157 possible_ortholog 3 retrogenes
retro_mmul_1734, retro_mmul_2459, retro_mmul_2474,
Nomascus leucogenys ENSNLEG00000001027 possible_ortholog 4 retrogenes
retro_nleu_1137, retro_nleu_2015, retro_nleu_2817, retro_nleu_2869,
Oryctolagus cuniculus ENSOCUG00000006751 possible_ortholog 3 retrogenes
retro_ocun_1510, retro_ocun_1623, retro_ocun_1679,
Otolemur garnettii ENSOGAG00000003767 ortholog_one2one 3 retrogenes
retro_ogar_1528, retro_ogar_1530, retro_ogar_1532,
Pteropus vampyrus ENSPVAG00000005246 ortholog_one2one 2 retrogenes
retro_pvam_224, retro_pvam_838,
Rattus norvegicus ENSRNOG00000008320 ortholog_one2one 3 retrogenes
retro_rnor_1747, retro_rnor_2612, retro_rnor_406,
Tupaia belangeri ENSTBEG00000014207 ortholog_one2one 8 retrogenes
retro_tbel_1839, retro_tbel_2439, retro_tbel_2478, retro_tbel_2907, retro_tbel_3127, retro_tbel_3466, retro_tbel_371, retro_tbel_4145,
Tursiops truncatus ENSTTRG00000011836 ortholog_one2one 3 retrogenes
retro_ttru_1643, retro_ttru_169, retro_ttru_291,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_3700 61.59 69.90
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Download FASTA sequences of all ENSMUSG00000025903 retrocopies