Parental gene:

Psmb5, ENSMUSG00000022193

Aliases:None
Description:proteasome (prosome, macropain) subunit, beta type 5 [Source:MGI Symbol;Acc:MGI:1194513]
Organism:Mouse (Mus musculus)
Coordinates:14:54614119..54617995(-)


>ENSMUSG00000022193
ATGGCGCTGGCTAGCGTGTTGCAGCGGCCGATGCCGGTGAATCAGCACGGGTTTTTTGGGCTCGGAGGTGGTGCAGATCT
GCTGGACTTGGGTCCGGGGAGTCCTGGTGATGGGCTGAGCCTAGCCGCGCCGAGCTGGGGCGTCCCGGAGGAGCCGCGAA
TCGAAATGCTTCACGGAACCACCACCCTGGCCTTCAAGTTTCTCCATGGAGTCATTGTTGCAGCGGATTCCCGGGCCACA
GCAGGTGCTTATATTGCTTCCCAGACGGTGAAGAAAGTAATAGAGATCAACCCGTACCTTCTGGGCACCATGGCTGGGGG
TGCAGCGGATTGCAGCTTCTGGGAGCGGTTGTTGGCTCGGCAGTGTCGAATCTATGAGCTTCGCAATAAGGAACGCATCT
CGGTCGCAGCAGCCTCCAAACTGCTCGCTAACATGGTGTATCAGTACAAAGGCATGGGGCTGTCTATGGGCACCATGATC
TGTGGCTGGGATAAGAGAGGCCCTGGCCTCTACTACGTAGACAGCGAGGGGAACAGGATCTCTGGGACCGCCTTCTCAGT
GGGCTCTGGCTCCGTGTATGCTTACGGCGTTATGGATCGAGGCTACTCCTATGACCTGAAAGTGGAGGAGGCCTATGATC
TGGCCCGCCGAGCCATCTACCAAGCCACCTACAGAGATGCCTACTCCGGAGGGGCAGTCAACCTCTACCACGTGCGGGAG
GATGGCTGGATCCGGGTGTCCAGTGACAATGTAGCTGACTTACATGACAAGTACAGTAGTGTATCTGTCCCCTGA

Library Parental gene expression (RPM)
SRP007412_brain 14 .02 RPM
SRP007412_cerebellum 10 .20 RPM
SRP007412_heart 25 .62 RPM
SRP007412_kidney 16 .25 RPM
SRP007412_liver 15 .10 RPM
SRP007412_testis 14 .32 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000008299 ortholog_one2one 4 retrogenes
retro_cjac_1983, retro_cjac_35, retro_cjac_3888, retro_cjac_4076,
Homo sapiens ENSG00000100804 ortholog_one2one 2 retrogenes
retro_hsap_1634, retro_hsap_95,
Gorilla gorilla ENSGGOG00000026856 ortholog_one2one 2 retrogenes
retro_ggor_1232, retro_ggor_156,
Latimeria chalumnae ENSLACG00000015194 ortholog_one2many 1 retrogene
retro_lcha_3,
Macropus eugenii ENSMEUG00000003572 ortholog_one2one 1 retrogene
retro_meug_28,
Myotis lucifugus ENSMLUG00000014281 ortholog_one2one 1 retrogene
retro_mluc_1428,
Macaca mulatta ENSMMUG00000006007 ortholog_one2one 1 retrogene
retro_mmul_1558,
Nomascus leucogenys ENSNLEG00000014891 ortholog_one2one 2 retrogenes
retro_nleu_1063, retro_nleu_2936,
Oryctolagus cuniculus ENSOCUG00000013109 ortholog_one2one 1 retrogene
retro_ocun_176,
Pongo abelii ENSPPYG00000005654 ortholog_one2many 1 retrogene
retro_pabe_171,
Sus scrofa ENSSSCG00000002036 ortholog_one2many 1 retrogene
retro_sscr_616,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_2887 98.49 100.00
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Download FASTA sequences of all ENSMUSG00000022193 retrocopies