Parental gene: | Eif2s1, ENSMUSG00000021116 |
| Aliases: | Eif2s1, 0910001O23Rik, 2410026C18Rik, 35kDa, Eif2a, eIF2alpha |
| Description: | eukaryotic translation initiation factor 2, subunit 1 alpha [Source:MGI Symbol;Acc:MGI:95299] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 12:78861818..78887010(+) |
>ENSMUSG00000021116
ATGCCGGGGCTAAGTTGTAGATTTTATCAACACAAATTTCCTGAGGTGGAAGATGTAGTGATGGTGAATGTAAGATCCAT
TGCTGAAATGGGGGCCTATGTCAGCTTGTTGGAATATAATAACATTGAAGGCATGATTCTTCTTAGTGAATTATCCAGAC
GACGTATCCGTTCTATAAACAAACTGATCCGAATTGGCAGAAATGAATGTGTTGTTGTCATTAGAGTGGATAAAGAAAAA
GGATATATAGATTTGTCAAAAAGAAGAGTTTCTCCAGAGGAAGCAATCAAATGTGAGGACAAATTCACAAAATCCAAAAC
TGTTTATAGCATTCTTCGCCATGTTGCTGAGGTATTAGAATATACCAAGGATGAGCAGCTGGAGAGCCTGTTCCAGAGGA
CTGCCTGGGTCTTCGATGACAAGTACAAGAGACCTGGATACGGTGCCTACGATGCTTTTAAGCATGCAGTCTCAGACCCA
TCTATCTTGGATAGTTTAGATTTGAATGAAGATGAAAGAGAAGTACTCATTAATAATATCAATAGGCGTTTGACCCCACA
AGCGGTCAAAATTCGAGCAGATATTGAAGTAGCTTGCTATGGTTATGAAGGCATTGATGCTGTAAAAGAAGCCCTGAGGG
CAGGTTTGAATTGTTCTACAGAAACCATGCCCATCAAGATTAATCTAATAGCTCCACCCAGGTATGTGATGACAACAACG
ACCCTGGAGAGGACAGAAGGCCTGTCTGTCCTCAATCAGGCTATGGCAGTTATCAAAGAGAAGATCGAGGAGAAGAGGGG
CGTCTTCAATGTTCAGATGGAGCCCAAAGTGGTCACAGATACAGATGAGACTGAACTTGCAAGGCAGCTGGAACGGCTGG
AGAGAGAAAATGCAGAAGTGGATGGAGATGATGATGCAGAAGAAATGGAAGCCAAAGCTGAAGATTAA
ATGCCGGGGCTAAGTTGTAGATTTTATCAACACAAATTTCCTGAGGTGGAAGATGTAGTGATGGTGAATGTAAGATCCAT
TGCTGAAATGGGGGCCTATGTCAGCTTGTTGGAATATAATAACATTGAAGGCATGATTCTTCTTAGTGAATTATCCAGAC
GACGTATCCGTTCTATAAACAAACTGATCCGAATTGGCAGAAATGAATGTGTTGTTGTCATTAGAGTGGATAAAGAAAAA
GGATATATAGATTTGTCAAAAAGAAGAGTTTCTCCAGAGGAAGCAATCAAATGTGAGGACAAATTCACAAAATCCAAAAC
TGTTTATAGCATTCTTCGCCATGTTGCTGAGGTATTAGAATATACCAAGGATGAGCAGCTGGAGAGCCTGTTCCAGAGGA
CTGCCTGGGTCTTCGATGACAAGTACAAGAGACCTGGATACGGTGCCTACGATGCTTTTAAGCATGCAGTCTCAGACCCA
TCTATCTTGGATAGTTTAGATTTGAATGAAGATGAAAGAGAAGTACTCATTAATAATATCAATAGGCGTTTGACCCCACA
AGCGGTCAAAATTCGAGCAGATATTGAAGTAGCTTGCTATGGTTATGAAGGCATTGATGCTGTAAAAGAAGCCCTGAGGG
CAGGTTTGAATTGTTCTACAGAAACCATGCCCATCAAGATTAATCTAATAGCTCCACCCAGGTATGTGATGACAACAACG
ACCCTGGAGAGGACAGAAGGCCTGTCTGTCCTCAATCAGGCTATGGCAGTTATCAAAGAGAAGATCGAGGAGAAGAGGGG
CGTCTTCAATGTTCAGATGGAGCCCAAAGTGGTCACAGATACAGATGAGACTGAACTTGCAAGGCAGCTGGAACGGCTGG
AGAGAGAAAATGCAGAAGTGGATGGAGATGATGATGCAGAAGAAATGGAAGCCAAAGCTGAAGATTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 25 .30 RPM |
| SRP007412_cerebellum | 20 .41 RPM |
| SRP007412_heart | 26 .24 RPM |
| SRP007412_kidney | 28 .24 RPM |
| SRP007412_liver | 28 .56 RPM |
| SRP007412_testis | 106 .43 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000016311 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000015368 | ortholog_one2one | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000003313 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000019003 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000009911 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000012023 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000009432 | ortholog_one2one | 3 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000009815 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_728 | 96.21 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_1342 | 93.81 | 92.38 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmus_1927 | 92.07 | 52.06 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mmus_1960 | 84.58 | 67.62 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000021116 retrocopies