Parental gene: | Pes1, ENSMUSG00000020430 |
| Aliases: | None |
| Description: | pescadillo homolog 1, containing BRCT domain (zebrafish) [Source:MGI Symbol;Acc:MGI:1890613] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 11:3963974..3980004(+) |
>ENSMUSG00000020430
ATGGGAGGTCTGGAGAAGAAGAAGTATGAACGAGGCTCTGCCACCAATTATATCACCCGAAACAAGGCCAGGAAGAAGCT
GCAGCTGAGCCTGCCTGACTTCAGGCGGCTGTGCATCCTGAAAGGTATTTATCCTCACGAACCCAAGCATAAGAAGAAAG
TTAACAAGGGTTCCACAGCAGCCCGGACATTTTACCTTATCAAAGACATTAAATTCCTCCTCCATGAGCCCATCGTCAAC
AAGTTCCGAGAGTACAAGGTGTTTGTTCGGAAGCTCCGCAAAGCCTATGGAAAGAGCGAATGGAATGCTGTGGAGCGCCT
GAAGGACAATAAACCCTGCTACAAACTTGACCACATTGTCAAGGAGCGGTACCCCACATTTATCGATGCTCTGCGGGACC
TCGATGATGCCCTGTCAATGTGCTTCCTCTTCTCCACCTTCCCTCGGACTGGCAAGTGTCATGTGCAGACCATTCAGTTG
TGCCGTAGGCTCACTGTGGAGTTCCTGCACTATGTCATCACTGCCCGAGCCCTGCGCAAGGTCTTCCTGTCCATTAAAGG
CATTTATTATCAGGCTGAGGTGCTGGGTCAGCCCATCGTATGGATTGCACCCTATGCTTTCTCCCATGATCATCCGACAG
ATGTGGACTACAGGGTCATGGCCACCTTCACTGAGTTCTATACCACGCTCCTGGGCTTTGTCAACTTCCGTCTCTACCAG
TCACTCAACCTTCACTACCCACCAAAGCTTGAAGGTCAAGCCCAAGCAGAGACAAAGATCAGCGAGGACACATATGCATT
GGACTCTGAGAGCTCTATGGAGAAACTGGCTGCCCTCAGTGCCAGCCTGGCCCGAGTGGTGGTGCCTGCTATAGAGGAGG
CTGAGGCTGATGAATTCCCTACTGATGGGGAGGTGACAGCACAGGAGGAAGATCGGAAGAAAGAGCTGGAGGCACAGGAA
AAGCACAAGAAACTCTTTGAAGGCCTGAAGTTCTTCCTGAACCGAGAGGTGCCCCGTGAAGCATTGGCCTTCATCATCAG
GAGTTTTGGTGGGGATGTATCCTGGGACAAGTCTCTGTGTATCGGAGCCACCTATGACGTCACAGACTCATGCATCACCC
ACCAGATTGTTGACCGGCCGGGGCAGCAAACCCCCATCATTGGCAGGTACTATGTACAGCCCCAGTGGGTCTTTGACTGT
GTGAATGCCCGGCTCCTCCTCCCTGTGGCAGAGTACTTCCCCGGGATGCAGCTGCCCCCACATCTTTCACCCTTCGTATC
TGAGAAGGAAGGAGATTACATTCCCCCTGAGAAGCTGAAGCTCCTGGCTCTGCAGCGGGGAGAAGACCCAGGACACTTGG
AAGAGGAGGAGGAGGAGGATGAAGATGATGACAACGAAGGTGATGTTGCAGCGGAAAATGAAGAGGAAGATGTGGAAGTT
GAATCGGAGGAGGAGGAGGAGGAGGAGGTGCACCTTTCGGCCTTGGAGCAGCACAGGCTGGAAGAGAAGAAACCCCAGGT
TATGGCCGGCACTGTGAAGCTGGAAGACAAGCAGCGGCTGGCCCAGGAGGAAGAGAGTGAGGCTAAGCGCTTGGCCATCA
TGATGATGAAAAAGCGAGAGAAGTACCTTTACCAAAAGATCATGTTTGGCAAGCGGCGCAAAATCCGAGAGGCCAACAAG
CTGGCAGAGAAGAGGAAAGCCCATGATGATGCTGTGAGGTCTGAGAAAAAGGCCAAGAGGACAAGGCCCGTGTGA
ATGGGAGGTCTGGAGAAGAAGAAGTATGAACGAGGCTCTGCCACCAATTATATCACCCGAAACAAGGCCAGGAAGAAGCT
GCAGCTGAGCCTGCCTGACTTCAGGCGGCTGTGCATCCTGAAAGGTATTTATCCTCACGAACCCAAGCATAAGAAGAAAG
TTAACAAGGGTTCCACAGCAGCCCGGACATTTTACCTTATCAAAGACATTAAATTCCTCCTCCATGAGCCCATCGTCAAC
AAGTTCCGAGAGTACAAGGTGTTTGTTCGGAAGCTCCGCAAAGCCTATGGAAAGAGCGAATGGAATGCTGTGGAGCGCCT
GAAGGACAATAAACCCTGCTACAAACTTGACCACATTGTCAAGGAGCGGTACCCCACATTTATCGATGCTCTGCGGGACC
TCGATGATGCCCTGTCAATGTGCTTCCTCTTCTCCACCTTCCCTCGGACTGGCAAGTGTCATGTGCAGACCATTCAGTTG
TGCCGTAGGCTCACTGTGGAGTTCCTGCACTATGTCATCACTGCCCGAGCCCTGCGCAAGGTCTTCCTGTCCATTAAAGG
CATTTATTATCAGGCTGAGGTGCTGGGTCAGCCCATCGTATGGATTGCACCCTATGCTTTCTCCCATGATCATCCGACAG
ATGTGGACTACAGGGTCATGGCCACCTTCACTGAGTTCTATACCACGCTCCTGGGCTTTGTCAACTTCCGTCTCTACCAG
TCACTCAACCTTCACTACCCACCAAAGCTTGAAGGTCAAGCCCAAGCAGAGACAAAGATCAGCGAGGACACATATGCATT
GGACTCTGAGAGCTCTATGGAGAAACTGGCTGCCCTCAGTGCCAGCCTGGCCCGAGTGGTGGTGCCTGCTATAGAGGAGG
CTGAGGCTGATGAATTCCCTACTGATGGGGAGGTGACAGCACAGGAGGAAGATCGGAAGAAAGAGCTGGAGGCACAGGAA
AAGCACAAGAAACTCTTTGAAGGCCTGAAGTTCTTCCTGAACCGAGAGGTGCCCCGTGAAGCATTGGCCTTCATCATCAG
GAGTTTTGGTGGGGATGTATCCTGGGACAAGTCTCTGTGTATCGGAGCCACCTATGACGTCACAGACTCATGCATCACCC
ACCAGATTGTTGACCGGCCGGGGCAGCAAACCCCCATCATTGGCAGGTACTATGTACAGCCCCAGTGGGTCTTTGACTGT
GTGAATGCCCGGCTCCTCCTCCCTGTGGCAGAGTACTTCCCCGGGATGCAGCTGCCCCCACATCTTTCACCCTTCGTATC
TGAGAAGGAAGGAGATTACATTCCCCCTGAGAAGCTGAAGCTCCTGGCTCTGCAGCGGGGAGAAGACCCAGGACACTTGG
AAGAGGAGGAGGAGGAGGATGAAGATGATGACAACGAAGGTGATGTTGCAGCGGAAAATGAAGAGGAAGATGTGGAAGTT
GAATCGGAGGAGGAGGAGGAGGAGGAGGTGCACCTTTCGGCCTTGGAGCAGCACAGGCTGGAAGAGAAGAAACCCCAGGT
TATGGCCGGCACTGTGAAGCTGGAAGACAAGCAGCGGCTGGCCCAGGAGGAAGAGAGTGAGGCTAAGCGCTTGGCCATCA
TGATGATGAAAAAGCGAGAGAAGTACCTTTACCAAAAGATCATGTTTGGCAAGCGGCGCAAAATCCGAGAGGCCAACAAG
CTGGCAGAGAAGAGGAAAGCCCATGATGATGCTGTGAGGTCTGAGAAAAAGGCCAAGAGGACAAGGCCCGTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 27 .31 RPM |
| SRP007412_cerebellum | 27 .36 RPM |
| SRP007412_heart | 25 .56 RPM |
| SRP007412_kidney | 38 .44 RPM |
| SRP007412_liver | 25 .23 RPM |
| SRP007412_testis | 54 .84 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000003565 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000004515 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_1393 | 91.83 | 77.40 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_3225 | 92.75 | 70.07 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000020430 retrocopies