Parental gene:

Slmo2, ENSMUSG00000016257

Aliases:Slmo2, 2310042G06Rik, AA407013
Description:slowmo homolog 2 (Drosophila) [Source:MGI Symbol;Acc:MGI:1913640]
Organism:Mouse (Mus musculus)
Coordinates:2:174465066..174473081(-)


>ENSMUSG00000016257
ATGAAGATCTGGACTTCGGAGCACGTCTTTGACCATCCATGGGAAACAGTCACTACGGCTGCAATGCAGAAATATCCAAA
CCCCATGAACCCGAGTGTGGTTGGCGTCGACGTGCTGGACAGACATGTCGATCCCTCTGGAAAGTTGCACAGCCACAGAC
TGCTCAGCACAGAGTGGGGCCTGCCTTCCATTGTGAAGTCTCTTATTGGTGCAGCAAGAACGAAAACGTACGTGCAGGAG
CATTCTGTAGTTGACCCGGTAACGAGGACAATGGAGCTCAAGTCCACCAACATCTCATTTACAAATATGGTCTCAGTAGA
TGAGAGGCTGACATACAAGCCACACCTACAGGACCCAGAGAAAACTGTCCTGACCCAGGAAGCCCTCATCACAGTGAAAG
GGGTCAGCCTCAGCAGCTACCTGGAAGGACTCATGGCAAGCACCATATCTTCCAATGCTAGCAAAGGCCGAGAAGCAATG
GAGTGGGTGATACATAAACTGAACGCTGAGATTGAGGAATTGGCAGCATCAGCAAGAGGAAGCATAAGGACACCAATGGC
GGCAGCGGCAGCACTGGTGGACAAATGA

Library Parental gene expression (RPM)
SRP007412_brain 30 .25 RPM
SRP007412_cerebellum 27 .66 RPM
SRP007412_heart 46 .07 RPM
SRP007412_kidney 37 .86 RPM
SRP007412_liver 28 .21 RPM
SRP007412_testis 21 .82 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000018905 possible_ortholog 4 retrogenes
retro_cjac_1286, retro_cjac_2921, retro_cjac_3171, retro_cjac_3236,
Dasypus novemcinctus ENSDNOG00000014548 ortholog_one2one 3 retrogenes
retro_dnov_1402, retro_dnov_2032, retro_dnov_2311,
Echinops telfairi ENSETEG00000009651 ortholog_one2one 3 retrogenes
retro_etel_1130, retro_etel_1262, retro_etel_632,
Loxodonta africana ENSLAFG00000000300 ortholog_one2one 1 retrogene
retro_lafr_700,
Myotis lucifugus ENSMLUG00000014907 possible_ortholog 2 retrogenes
retro_mluc_1887, retro_mluc_845,
Macaca mulatta ENSMMUG00000007560 possible_ortholog 4 retrogenes
retro_mmul_1155, retro_mmul_1644, retro_mmul_2123, retro_mmul_539,
Monodelphis domestica ENSMODG00000016608 ortholog_one2one 5 retrogenes
retro_mdom_1596, retro_mdom_1619, retro_mdom_1620, retro_mdom_1655, retro_mdom_405,
Mus musculus ENSMUSG00000024530 within_species_paralog 1 retrogene
retro_mmus_1332,
Oryctolagus cuniculus ENSOCUG00000005621 ortholog_one2one 8 retrogenes
retro_ocun_1944, retro_ocun_1954, retro_ocun_455, retro_ocun_486, retro_ocun_549, retro_ocun_619, retro_ocun_775, retro_ocun_926,
Ochotona princeps ENSOPRG00000002550 ortholog_one2one 8 retrogenes
retro_opri_1069, retro_opri_1090, retro_opri_141, retro_opri_216, retro_opri_45, retro_opri_663, retro_opri_683, retro_opri_770,
Rattus norvegicus ENSRNOG00000046644 ortholog_one2one 2 retrogenes
retro_rnor_422, retro_rnor_423,
Sorex araneus ENSSARG00000004671 ortholog_one2one 2 retrogenes
retro_sara_282, retro_sara_430,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_630 52.46 60.51
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2. retro_mmus_2725 84.83 73.33
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Download FASTA sequences of all ENSMUSG00000016257 retrocopies