Parental gene:

C330007P06Rik, ENSMUSG00000006423

Aliases:None
Description:RIKEN cDNA C330007P06 gene [Source:MGI Symbol;Acc:MGI:1924894]
Organism:Mouse (Mus musculus)
Coordinates:X:36823736..36874111(-)


>ENSMUSG00000006423
ATGCCGAAAGTCGTGTCGCGGTCGGTGGTCTGCTCAGACACCCGGGACCGCGAGGAATATGATGATGGCGAGAAGCCCCT
CCATGTCTACTACTGTTTATGTGGCCAGATGGTCCTGGTGCTGGATTGCCAGTTAGAGAAATTGCCCATGAGGCCCCGGG
ACCGGTCTCGCGTGATCGATGCTGCCAAACATGCTCACAAGTTTTGTAACACAGAAGATGAGGAGACTACTTATCTTCGG
AGGCCTGAGGGCATTGAACGTCAGTACAGGAAGAAGTGTGCAAAGTGTGGACTGCCGCTCTTCTACCAATCCCAGCCGAA
GAATGCTCCTGTGACCTTCATTGTGGATGGAGCAGTAGTGAAATTTGGCCAAGGCTTTGGGAAAACCAATATATATACTC
AGAAACAAGAGCCTCCTAAGAAGGTTATGATGACCAAAAGGACTAAAGACATGGGCAAGTTCAGCTCTGTTACTGTGTCT
ACCATTGATGAAGAAGAAGAGGAGATAGAGGCTAGGGAAGTTGCTGACTCTTACGCGCAGAATGCCAAAGTGATTGAAAA
GCAGCTGGAGCGCAAAGGCATGAGCAAGAGGAGGCTGCAGGAGTTGGCTGAATTGGAAGCCAAGAAAGCAAAAATGAAGG
GGACCCTGATCGACAATCAGTTCAAATAA

Library Parental gene expression (RPM)
SRP007412_brain 28 .34 RPM
SRP007412_cerebellum 26 .79 RPM
SRP007412_heart 13 .42 RPM
SRP007412_kidney 27 .51 RPM
SRP007412_liver 22 .75 RPM
SRP007412_testis 5 .12 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000005111 possible_ortholog 1 retrogene
retro_cjac_311,
Homo sapiens ENSG00000018610 ortholog_one2one 1 retrogene
retro_hsap_4044,
Gorilla gorilla ENSGGOG00000013324 ortholog_one2one 1 retrogene
retro_ggor_2711,
Latimeria chalumnae ENSLACG00000012468 ortholog_one2many 1 retrogene
retro_lcha_59,
Myotis lucifugus ENSMLUG00000015751 ortholog_one2many 1 retrogene
retro_mluc_72,
Macaca mulatta ENSMMUG00000022665 ortholog_one2one 1 retrogene
retro_mmul_2333,
Nomascus leucogenys ENSNLEG00000014862 ortholog_one2one 1 retrogene
retro_nleu_2057,
Otolemur garnettii ENSOGAG00000012474 ortholog_one2one 1 retrogene
retro_ogar_145,
Pongo abelii ENSPPYG00000020670 ortholog_one2many 1 retrogene
retro_pabe_177,
Pan troglodytes ENSPTRG00000022224 possible_ortholog 1 retrogene
retro_ptro_104,
Sorex araneus ENSSARG00000003163 ortholog_one2one 1 retrogene
retro_sara_5,
Sarcophilus harrisii ENSSHAG00000006319 ortholog_one2many 1 retrogene
retro_shar_16,
Ictidomys tridecemlineatus ENSSTOG00000011579 ortholog_one2one 1 retrogene
retro_itri_103,
Tursiops truncatus ENSTTRG00000013101 ortholog_one2one 2 retrogenes
retro_ttru_231, retro_ttru_77,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_1715 99.10 100.00
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Download FASTA sequences of all ENSMUSG00000006423 retrocopies