Parental gene:

Cnn2, ENSMUSG00000004665

Aliases:None
Description:calponin 2 [Source:MGI Symbol;Acc:MGI:105093]
Organism:Mouse (Mus musculus)
Coordinates:10:79988583..79996062(+)


>ENSMUSG00000004665
ATGAGCTCCACGCAGTTCAACAAGGGCCCGTCCTACGGGCTCTCGGCCGAGGTCAAGAACCGGCTCCTGTCCAAATATGA
CCCCCAAAAGGAAGCAGAACTCCGAAGCTGGATAGAGGGACTCACGGGCCTCTCCATTGGCCCTGACTTCCAGAAGGGTC
TGAAAGATGGGGTTATCCTATGCACACTCATGAACAAGCTGCAGCCAGGCTCCGTCCCTAAAATCAACCGCTCTATGCAG
AACTGGCACCAGCTAGAAAATCTCTCCAACTTCATCAAGGCCATGGTCAGCTACGGCATGAACCCTGTGGACCTGTTTGA
GGCCAATGACCTGTTCGAGAGCGGGAACATGACACAGGTGCAAGTGTCTCTGCTTGCACTGGCTGGAAAGGCCAAGACCA
AGGGGCTGCAGAGTGGTGTGGACATTGGAGTTAAGTATTCGGAGAAACAGGAGAGGAACTTTGACGACGCCACCATGAAG
GCCGGCCAGTGCGTCATCGGGCTGCAGATGGGCACCAACAAGTGTGCCAGCCAGTCTGGCATGACAGCCTATGGTACCAG
GAGACATCTCTATGACCCCAAGAACCATATCCTGCCTCCCATGGACCACTGCACCATCAGCCTCCAGATGGGCACCAACA
AGTGTGCCAGCCAGGTGGGCATGACAGCTCCAGGGACCCGGAGGCACATCTATGACACCAAGCTGGGCACCGACAAGTGC
GACAACTCTTCCATGTCCCTGCAGATGGGCTACACGCAGGGCGCCAACCAGAGCGGTCAGGTCTTCGGACTGGGGCGGCA
GATCTACGATCCCAAGTATTGCCCACAGGGCTCTGCAGCTGACGGGGCTCCTGCGGGTGACGGCCAAGGCGAGGCCCCAG
AGTACCTGGCCTACTGCCAGGAGGAAGCTGGCTACTGA

Library Parental gene expression (RPM)
SRP007412_brain 5 .35 RPM
SRP007412_cerebellum 7 .43 RPM
SRP007412_heart 43 .80 RPM
SRP007412_kidney 40 .48 RPM
SRP007412_liver 6 .55 RPM
SRP007412_testis 3 .84 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000064666 ortholog_one2one 16 retrogenes
retro_hsap_1168, retro_hsap_1575, retro_hsap_1697, retro_hsap_2127, retro_hsap_2495, retro_hsap_255, retro_hsap_2576, retro_hsap_2764, retro_hsap_3505, retro_hsap_4168, retro_hsap_4170, retro_hsap_4175, retro_hsap_4257, retro_hsap_4269, retro_hsap_4326, retro_hsap_943,
Gorilla gorilla ENSGGOG00000028153 ortholog_one2one 9 retrogenes
retro_ggor_1199, retro_ggor_1271, retro_ggor_1555, retro_ggor_1612, retro_ggor_1646, retro_ggor_1922, retro_ggor_2370, retro_ggor_305, retro_ggor_762,
Macaca mulatta ENSMMUG00000015306 possible_ortholog 1 retrogene
retro_mmul_1131,
Mus musculus ENSMUSG00000053931 within_species_paralog 2 retrogenes
retro_mmus_1052, retro_mmus_2544,
Pongo abelii ENSPPYG00000009302 ortholog_one2one 12 retrogenes
retro_pabe_1299, retro_pabe_1397, retro_pabe_1838, retro_pabe_1920, retro_pabe_2171, retro_pabe_2249, retro_pabe_2900, retro_pabe_3512, retro_pabe_3515, retro_pabe_3543, retro_pabe_3823, retro_pabe_407,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_1824 85.11 100.00
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2. retro_mmus_2317 89.15 84.26
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Download FASTA sequences of all ENSMUSG00000004665 retrocopies