Parental gene: | CNN2, ENSG00000064666 |
| Aliases: | None |
| Description: | calponin 2 [Source:HGNC Symbol;Acc:2156] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 19:1026297..1039068(+) |
>ENSG00000064666
ATGAGCTCCACGCAGTTCAACAAGGGCCCCTCGTACGGGCTGTCGGCCGAGGTCAAGAACCGGCTCCTGTCCAAATATGA
CCCCCAGAAGGAGGCAGAGCTCCGCACCTGGATCGAGGGACTCACCGGCCTCTCCATCGGCCCCGACTTCCAGAAGGGCC
TGAAGGATGGAACTATCTTATGCACACTCATGAACAAGCTACAGCCGGGCTCCGTCCCCAAGATCAACCGCTCCATGCAG
AACTGGCACCAGCTAGAAAACCTGTCCAACTTCATCAAGGCCATGGTCAGCTACGGCATGAACCCTGTGGACCTGTTCGA
GGCCAACGACCTGTTTGAGAGTGGGAACATGACGCAGGTGCAGGTGTCTCTTCTCGCCCTGGCGGGGAAGGCCAAGACTA
AGGGGCTGCAGAGCGGGGTGGACATTGGCGTCAAGTACTCGGAGAAGCAGGAGCGGAATTTCGACGATGCCACCATGAAG
GCTGGCCAGTGCGTCATCGGGCTGCAGATGGGCACCAACAAATGCGCCAGCCAGTCGGGCATGACTGCCTACGGCACGAG
AAGGCATCTCTATGACCCCAAGAACCATATCCTGCCCCCCATGGACCACTCGACCATCAGCCTCCAGATGGGCACGAACA
AGTGTGCCAGCCAGGTGGGCATGACGGCTCCCGGGACCCGGCGGCACATCTATGATACCAAGCTGGGAACCGACAAGTGT
GACAACTCCTCCATGTCCCTGCAGATGGGCTACACGCAGGGCGCCAACCAGAGCGGCCAGGTCTTCGGCCTGGGCCGGCA
GATATATGACCCCAAGTACTGCCCGCAAGGCACAGTGGCCGATGGGGCTCCCTCGGGCACCGGCGACTGCCCGGACCCGG
GGGAGGTCCCTGAATATCCCCCTTACTACCAGGAGGAGGCCGGCTACTGA
ATGAGCTCCACGCAGTTCAACAAGGGCCCCTCGTACGGGCTGTCGGCCGAGGTCAAGAACCGGCTCCTGTCCAAATATGA
CCCCCAGAAGGAGGCAGAGCTCCGCACCTGGATCGAGGGACTCACCGGCCTCTCCATCGGCCCCGACTTCCAGAAGGGCC
TGAAGGATGGAACTATCTTATGCACACTCATGAACAAGCTACAGCCGGGCTCCGTCCCCAAGATCAACCGCTCCATGCAG
AACTGGCACCAGCTAGAAAACCTGTCCAACTTCATCAAGGCCATGGTCAGCTACGGCATGAACCCTGTGGACCTGTTCGA
GGCCAACGACCTGTTTGAGAGTGGGAACATGACGCAGGTGCAGGTGTCTCTTCTCGCCCTGGCGGGGAAGGCCAAGACTA
AGGGGCTGCAGAGCGGGGTGGACATTGGCGTCAAGTACTCGGAGAAGCAGGAGCGGAATTTCGACGATGCCACCATGAAG
GCTGGCCAGTGCGTCATCGGGCTGCAGATGGGCACCAACAAATGCGCCAGCCAGTCGGGCATGACTGCCTACGGCACGAG
AAGGCATCTCTATGACCCCAAGAACCATATCCTGCCCCCCATGGACCACTCGACCATCAGCCTCCAGATGGGCACGAACA
AGTGTGCCAGCCAGGTGGGCATGACGGCTCCCGGGACCCGGCGGCACATCTATGATACCAAGCTGGGAACCGACAAGTGT
GACAACTCCTCCATGTCCCTGCAGATGGGCTACACGCAGGGCGCCAACCAGAGCGGCCAGGTCTTCGGCCTGGGCCGGCA
GATATATGACCCCAAGTACTGCCCGCAAGGCACAGTGGCCGATGGGGCTCCCTCGGGCACCGGCGACTGCCCGGACCCGG
GGGAGGTCCCTGAATATCCCCCTTACTACCAGGAGGAGGCCGGCTACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 12 .93 RPM |
| bodymap2_lung | 217 .30 RPM |
| bodymap2_breast | 71 .30 RPM |
| bodymap2_adipose | 112 .57 RPM |
| bodymap2_adrenal | 74 .98 RPM |
| bodymap2_skeletal_muscle | 7 .91 RPM |
| bodymap2_thyroid | 73 .44 RPM |
| bodymap2_prostate | 86 .83 RPM |
| bodymap2_colon | 53 .46 RPM |
| bodymap2_testis | 39 .76 RPM |
| bodymap2_brain | 7 .85 RPM |
| bodymap2_heart | 21 .03 RPM |
| bodymap2_white_blood_cells | 341 .88 RPM |
| bodymap2_lymph_node | 138 .72 RPM |
| bodymap2_ovary | 182 .32 RPM |
| bodymap2_kidney | 45 .66 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000117519 | within_species_paralog | 1 retrogene | |
| Homo sapiens | ENSG00000158710 | within_species_paralog | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000028153 | ortholog_one2one | 9 retrogenes | |
| Macaca mulatta | ENSMMUG00000015306 | possible_ortholog | 1 retrogene | |
| Mus musculus | ENSMUSG00000004665 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000009302 | ortholog_one2one | 12 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_255 | 77.67 | 65.70 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_943 | 83.10 | 68.93 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_hsap_1168 | 78.49 | 78.96 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_hsap_1575 | 80.60 | 96.44 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_hsap_1697 | 83.77 | 99.35 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_hsap_2127 | 79.08 | 98.38 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_hsap_2495 | 77.22 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_hsap_2576 | 81.41 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_hsap_2764 | 84.44 | 96.76 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_hsap_3505 | 88.65 | 74.11 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_hsap_4168 | 81.67 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 12. | retro_hsap_4170 | 80.13 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 13. | retro_hsap_4175 | 76.43 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 14. | retro_hsap_4257 | 81.03 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 15. | retro_hsap_4269 | 81.03 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 16. | retro_hsap_4326 | 77.22 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000064666 retrocopies