Parental gene: | Cct3, ENSMUSG00000001416 |
| Aliases: | Cct3, AL024092, Cctg, Tcp1-rs3, TriC-P5 |
| Description: | chaperonin containing Tcp1, subunit 3 (gamma) [Source:MGI Symbol;Acc:MGI:104708] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 3:88297115..88321767(+) |
>ENSMUSG00000001416
ATGATGGGCCACCGTCCAGTGCTCGTGCTCAGTCAGAACACAAAGCGTGAATCTGGAAGAAAAGTTCAGTCTGGAAATAT
CAATGCTGCAAAGACAATTGCAGACATCATCCGGACCTGCTTGGGACCTAAATCTATGATGAAGATGCTTTTGGACCCAA
TGGGAGGCATCGTGATGACCAATGATGGCAATGCCATTCTTCGAGAGATTCAAGTCCAGCATCCCGCAGCAAAGTCCATG
ATTGAAATTAGCAGGACCCAGGATGAAGAGGTTGGAGATGGGACCACATCAGTAATTATTCTTGCGGGAGAAATGCTCTC
TGTGGCTGAACACTTCCTAGAGCAGCAGATGCACCCAACAGTGGTGATCAGTGCTTACCGCATGGCACTGGATGATATGA
TCAGCACTCTGAAGAAAATCAGTACTCCTGTTGATGTCAATAACCGTGAGATGATGTTGAGCATCATCAATAGCTCTATT
ACTACAAAAGTCATCAGTCGGTGGTCCTCCTTGGCATGCAACATTGCACTGGATGCTGTTAAGACTGTGCAGTTTGAAGA
GAATGGCAGAAAGGAAATTGACATCAAAAAATATGCAAGGGTAGAAAAGATACCCGGGGGCATCATTGAAGACTCATGTG
TCTTACGTGGAGTTATGATTAACAAGGATGTGACCCATCCAAGGATGCGCCGCTATATTAAGAATCCTCGAATTGTGCTA
TTGGATTCTTCTTTGGAGTACAAGAAAGGAGAAAGCCAGACCGACATCGAGATTACCCGGGAGGAGGACTTCACGCGGAT
CCTGCAGATGGAGGAGGAGTACATCCATCAGCTGTGTGAGGACATCATCCAGCTGAAGCCTGACGTGGTCATCACAGAGA
AGGGCATCTCAGATTTAGCTCAGCACTACCTCATGCGGGCCAATGTCACAGCCATTCGTAGAGTCCGGAAAACAGACAAT
AATCGCATTGCTAGAGCCTGTGGGGCACGGATAGTCAGCCGACCTGAGGAACTGAGAGAAGATGATGTTGGTACAGGGGC
AGGCTTATTGGAAATCAAGAAGATTGGAGATGAGTACTTTACATTCATCACTGACTGCAAAGACCCAAAGGCCTGCACCA
TTCTTCTTAGAGGAGCCAGCAAAGAGATACTCTCGGAAGTAGAACGCAACCTCCAGGATGCCATGCAAGTGTGCCGCAAT
GTTCTACTGGACCCTCAGCTGGTGCCTGGTGGTGGAGCCTCTGAGATGGCTGTGGCTCATGCCTTGACAGAAAAATCTAA
GGCCATGACTGGTGTGGAACAATGGCCATATAGAGCTGTGGCCCAGGCGTTAGAGGTCATCCCTCGGACCTTGATCCAGA
ATTGTGGGGCCAGTACCATTCGTCTGCTTACCTCCCTTCGGGCCAAGCACACACAGGAGAGTTGTGAGACCTGGGGTGTG
AATGGTGAGACTGGTACCTTGGTGGACATGAAAGAGCTGGGTATTTGGGAGCCATTGGCTGTGAAGCTACAAACGTACAA
AACAGCAGTAGAGACTGCAGTTCTGCTTCTGCGGATTGATGACATTGTCTCTGGCCACAAGAAGAAGGGTGATGACCAGA
ACCGGCAAACTGGTGCTCCAGATGCTGGCCAGGAGTGA
ATGATGGGCCACCGTCCAGTGCTCGTGCTCAGTCAGAACACAAAGCGTGAATCTGGAAGAAAAGTTCAGTCTGGAAATAT
CAATGCTGCAAAGACAATTGCAGACATCATCCGGACCTGCTTGGGACCTAAATCTATGATGAAGATGCTTTTGGACCCAA
TGGGAGGCATCGTGATGACCAATGATGGCAATGCCATTCTTCGAGAGATTCAAGTCCAGCATCCCGCAGCAAAGTCCATG
ATTGAAATTAGCAGGACCCAGGATGAAGAGGTTGGAGATGGGACCACATCAGTAATTATTCTTGCGGGAGAAATGCTCTC
TGTGGCTGAACACTTCCTAGAGCAGCAGATGCACCCAACAGTGGTGATCAGTGCTTACCGCATGGCACTGGATGATATGA
TCAGCACTCTGAAGAAAATCAGTACTCCTGTTGATGTCAATAACCGTGAGATGATGTTGAGCATCATCAATAGCTCTATT
ACTACAAAAGTCATCAGTCGGTGGTCCTCCTTGGCATGCAACATTGCACTGGATGCTGTTAAGACTGTGCAGTTTGAAGA
GAATGGCAGAAAGGAAATTGACATCAAAAAATATGCAAGGGTAGAAAAGATACCCGGGGGCATCATTGAAGACTCATGTG
TCTTACGTGGAGTTATGATTAACAAGGATGTGACCCATCCAAGGATGCGCCGCTATATTAAGAATCCTCGAATTGTGCTA
TTGGATTCTTCTTTGGAGTACAAGAAAGGAGAAAGCCAGACCGACATCGAGATTACCCGGGAGGAGGACTTCACGCGGAT
CCTGCAGATGGAGGAGGAGTACATCCATCAGCTGTGTGAGGACATCATCCAGCTGAAGCCTGACGTGGTCATCACAGAGA
AGGGCATCTCAGATTTAGCTCAGCACTACCTCATGCGGGCCAATGTCACAGCCATTCGTAGAGTCCGGAAAACAGACAAT
AATCGCATTGCTAGAGCCTGTGGGGCACGGATAGTCAGCCGACCTGAGGAACTGAGAGAAGATGATGTTGGTACAGGGGC
AGGCTTATTGGAAATCAAGAAGATTGGAGATGAGTACTTTACATTCATCACTGACTGCAAAGACCCAAAGGCCTGCACCA
TTCTTCTTAGAGGAGCCAGCAAAGAGATACTCTCGGAAGTAGAACGCAACCTCCAGGATGCCATGCAAGTGTGCCGCAAT
GTTCTACTGGACCCTCAGCTGGTGCCTGGTGGTGGAGCCTCTGAGATGGCTGTGGCTCATGCCTTGACAGAAAAATCTAA
GGCCATGACTGGTGTGGAACAATGGCCATATAGAGCTGTGGCCCAGGCGTTAGAGGTCATCCCTCGGACCTTGATCCAGA
ATTGTGGGGCCAGTACCATTCGTCTGCTTACCTCCCTTCGGGCCAAGCACACACAGGAGAGTTGTGAGACCTGGGGTGTG
AATGGTGAGACTGGTACCTTGGTGGACATGAAAGAGCTGGGTATTTGGGAGCCATTGGCTGTGAAGCTACAAACGTACAA
AACAGCAGTAGAGACTGCAGTTCTGCTTCTGCGGATTGATGACATTGTCTCTGGCCACAAGAAGAAGGGTGATGACCAGA
ACCGGCAAACTGGTGCTCCAGATGCTGGCCAGGAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 95 .67 RPM |
| SRP007412_cerebellum | 110 .68 RPM |
| SRP007412_heart | 101 .98 RPM |
| SRP007412_kidney | 122 .12 RPM |
| SRP007412_liver | 93 .86 RPM |
| SRP007412_testis | 332 .48 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000005776 | ortholog_one2one | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000009131 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000008967 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000019090 | ortholog_one2many | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000001798 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_824 | 80.31 | 86.98 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_2352 | 88.32 | 64.17 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000001416 retrocopies