Parental gene:

RPS23, ENSMODG00000020255

Aliases:None
Description:ribosomal protein S23 [Source:HGNC Symbol;Acc:10410]
Organism:Opossum (Monodelphis domestica)
Coordinates:3:225375789..225379400(+)


>ENSMODG00000020255
ATGGGTAAGTGCCGAGGTCTTCGTACTGCCAGAAAGCTTCGAAGCCATAGAAGAGACCAAAAGTGGCATGACAAACAGTA
CAAGAAAGCCCATTTGGGCACTGCCCTGAAGGCCAACCCTTTTGGAGGAGCATCTCATGCAAAAGGGATTGTCTTGGAAA
AAGTTGGTGTGGAGGCTAAGCAGCCCAATTCTGCCATTCGGAAGTGTGTGAGAGTCCAGCTAATTAAGAACGGCAAAAAA
ATCACTGCCTTTGTTCCCAATGATGGCTGCTTGAACTTTATTGAGGAAAACGATGAAGTTTTGGTTGCTGGATTTGGTCG
GAAAGGTCACGCTGTTGGTGATATTCCTGGAGTCCGCTTCAAAGTTGTAAAAGTTGCAAATGTTTCTCTTCTGGCCTTGT
ACAAAGGCAAGAAGGAAAGACCAAGATCATAA

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000013358 possible_ortholog 3 retrogenes
retro_btau_173, retro_btau_205, retro_btau_80,
Callithrix jacchus ENSCJAG00000011247 possible_ortholog 2 retrogenes
retro_cjac_126, retro_cjac_256,
Homo sapiens ENSG00000186468 ortholog_one2one 6 retrogenes
retro_hsap_1778, retro_hsap_2940, retro_hsap_3107, retro_hsap_3287, retro_hsap_3989, retro_hsap_4697,
Gorilla gorilla ENSGGOG00000025014 ortholog_one2one 6 retrogenes
retro_ggor_1316, retro_ggor_2038, retro_ggor_2131, retro_ggor_2237, retro_ggor_2677, retro_ggor_286,
Macaca mulatta ENSMMUG00000003578 possible_ortholog 4 retrogenes
retro_mmul_1239, retro_mmul_1974, retro_mmul_2305, retro_mmul_852,
Mustela putorius furo ENSMPUG00000008114 ortholog_one2one 1 retrogene
retro_mputfur_1298,
Nomascus leucogenys ENSNLEG00000013203 ortholog_one2one 3 retrogenes
retro_nleu_1353, retro_nleu_1909, retro_nleu_764,
Oryctolagus cuniculus ENSOCUG00000010363 possible_ortholog 2 retrogenes
retro_ocun_195, retro_ocun_95,
Rattus norvegicus ENSRNOG00000016580 possible_ortholog 12 retrogenes
retro_rnor_100, retro_rnor_1394, retro_rnor_149, retro_rnor_1691, retro_rnor_1941, retro_rnor_1959, retro_rnor_1982, retro_rnor_2119, retro_rnor_2182, retro_rnor_2492, retro_rnor_525, retro_rnor_559,
Sarcophilus harrisii ENSSHAG00000008347 possible_ortholog 2 retrogenes
retro_shar_257, retro_shar_348,
Sus scrofa ENSSSCG00000014133 ortholog_one2one 1 retrogene
retro_sscr_92,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_395 69.86 99.30
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2. retro_mdom_1518 93.75 100.00
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3. retro_mdom_1612 56.49 90.21
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Download FASTA sequences of all ENSMODG00000020255 retrocopies