Parental gene:

RPS18, ENSMODG00000014210

Aliases:None
Description:ribosomal protein S18 [Source:HGNC Symbol;Acc:10401]
Organism:Opossum (Monodelphis domestica)
Coordinates:2:270779764..270787116(+)


>ENSMODG00000014210
TCTCTTGTAATTCCCGAGAAGTTCCAGCACATTTTGCGAGTGCTCAACACCAACATTGATGGACGGCGGAAAATAGCTTT
TGCCATCACAGCCATCAAGGGTGTGGGTCGAAGATATGCCCATGTAGTACTGAGGAAAGCAGACATTGACCTCACCAAGA
GGGCTGGTGAACTCACTGAAGATGAAGTGGAGCGCGTGATCACTATCATGCAGAATCCTCGGCAATACAAGATCCCAGAC
TGGTTCCTTAACAGACAGAAAGATGTAAAGGATGGAAAATACAGCCAGGTTCTGGCTAATGGTCTGGACAATAAGCTGCG
TGAGGACCTGGAACGACTGAGAGATTCGGCACATCGTGCTTCGACACTCTGGGGTGATCTCCGGGTCCGTGGCCAGCACA
CCAAGACTACAGGCCGCAGGGGTCGCACTGTGGGTGTGTCCAAGAAGAAGTAA

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000010356 possible_ortholog 1 retrogene
retro_cjac_3061,
Callithrix jacchus ENSCJAG00000021650 possible_ortholog 5 retrogenes
retro_cjac_22, retro_cjac_245, retro_cjac_2529, retro_cjac_2893, retro_cjac_2955,
Gorilla gorilla ENSGGOG00000006571 possible_ortholog 5 retrogenes
retro_ggor_1496, retro_ggor_2310, retro_ggor_344, retro_ggor_77, retro_ggor_93,
Loxodonta africana ENSLAFG00000032173 ortholog_one2one 1 retrogene
retro_lafr_1171,
Myotis lucifugus ENSMLUG00000007360 possible_ortholog 2 retrogenes
retro_mluc_181, retro_mluc_932,
Macaca mulatta ENSMMUG00000003867 possible_ortholog 1 retrogene
retro_mmul_2198,
Mus musculus ENSMUSG00000008668 possible_ortholog 2 retrogenes
retro_mmus_57, retro_mmus_66,
Nomascus leucogenys ENSNLEG00000006840 possible_ortholog 10 retrogenes
retro_nleu_1074, retro_nleu_1161, retro_nleu_1176, retro_nleu_1466, retro_nleu_219, retro_nleu_2572, retro_nleu_2616, retro_nleu_525, retro_nleu_60, retro_nleu_737,
Oryctolagus cuniculus ENSOCUG00000010546 possible_ortholog 1 retrogene
retro_ocun_31,
Pongo abelii ENSPPYG00000025953 possible_ortholog 14 retrogenes
retro_pabe_1138, retro_pabe_128, retro_pabe_1481, retro_pabe_1482, retro_pabe_1813, retro_pabe_1881, retro_pabe_2303, retro_pabe_2407, retro_pabe_2663, retro_pabe_2833, retro_pabe_2967, retro_pabe_3013, retro_pabe_3070, retro_pabe_368,
Pan troglodytes ENSPTRG00000018039 possible_ortholog 1 retrogene
retro_ptro_121,
Rattus norvegicus ENSRNOG00000028505 possible_ortholog 4 retrogenes
retro_rnor_102, retro_rnor_234, retro_rnor_29, retro_rnor_70,
Sarcophilus harrisii ENSSHAG00000006857 possible_ortholog 2 retrogenes
retro_shar_265, retro_shar_563,
Sarcophilus harrisii ENSSHAG00000008658 possible_ortholog 1 retrogene
retro_shar_618,
Sus scrofa ENSSSCG00000001502 possible_ortholog 5 retrogenes
retro_sscr_112, retro_sscr_156, retro_sscr_157, retro_sscr_2, retro_sscr_831,
Tupaia belangeri ENSTBEG00000012708 possible_ortholog 40 retrogenes
retro_tbel_1070, retro_tbel_1739, retro_tbel_1745, retro_tbel_1806, retro_tbel_1818, retro_tbel_1827, retro_tbel_1855, retro_tbel_205, retro_tbel_2087, retro_tbel_211, retro_tbel_2299, retro_tbel_2309, retro_tbel_2312, retro_tbel_234, retro_tbel_2364, retro_tbel_2424, retro_tbel_2473, retro_tbel_250, retro_tbel_2682, retro_tbel_2768, retro_tbel_295, retro_tbel_3189, retro_tbel_3317, retro_tbel_3383, retro_tbel_3625, retro_tbel_363, retro_tbel_3686, retro_tbel_3731, retro_tbel_3870, retro_tbel_4100, retro_tbel_4215, retro_tbel_4365, retro_tbel_45, retro_tbel_4562, retro_tbel_4578, retro_tbel_462, retro_tbel_57, retro_tbel_578, retro_tbel_856, retro_tbel_941,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_642 58.41 74.67
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_mdom_1041 55.84 51.33
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_mdom_1286 81.72 62.00
Please wait, loading
Please wait, loading
Please wait, loading
4. retro_mdom_1514 72.29 54.67
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSMODG00000014210 retrocopies