Parental gene:

UBE2B, ENSMODG00000014209

Aliases:None
Description:ubiquitin-conjugating enzyme E2B [Source:HGNC Symbol;Acc:12473]
Organism:Opossum (Monodelphis domestica)
Coordinates:1:302691896..302701960(-)


>ENSMODG00000014209
ATGTCGACCCCGGCCAGGAGGAGGCTCATGCGGGACTTCAAGCGATTGCAAGAAGACCCACCTGTGGGTGTCAGCGGCGC
ACCATCTGAAAACAATATCATGCAGTGGAATGCAGTTATATTTGGGCCAGAAGGCACACCCTTTGAGGATGGTACCTTTA
AACTAGTAATAGAATTCTCAGAAGAGTATCCGAATAAACCTCCCACTGTTAGGTTCTTATCAAAGATGTTTCATCCAAAT
GTCTATGCCGATGGTAGCATATGTTTAGATATCCTCCAGAATCGTTGGAGTCCAACGTATGATGTGTCCTCTATTTTAAC
ATCAATTCAGTCTCTGCTGGATGAACCTAATCCCAACAGTCCTGCCAATAGCCAGGCAGCGCAGCTTTATCAGGAAAACA
AACGAGAATATGAGAAAAGAGTTTCAGCTATTGTTGAACAAAGCTGGAATGATTCATAA

Library Parental gene expression (RPM)
SRP007412_brain 174 .98 RPM
SRP007412_cerebellum 113 .61 RPM
SRP007412_heart 405 .68 RPM
SRP007412_kidney 158 .02 RPM
SRP007412_liver 158 .60 RPM
SRP007412_testis 188 .77 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000001019 ortholog_one2many 2 retrogenes
retro_cfam_2099, retro_cfam_216,
Dipodomys ordii ENSDORG00000002525 ortholog_one2one 1 retrogene
retro_dord_646,
Echinops telfairi ENSETEG00000006522 ortholog_one2one 2 retrogenes
retro_etel_1531, retro_etel_771,
Macropus eugenii ENSMEUG00000004740 ortholog_one2one 1 retrogene
retro_meug_718,
Myotis lucifugus ENSMLUG00000012910 ortholog_one2one 4 retrogenes
retro_mluc_1319, retro_mluc_1520, retro_mluc_2216, retro_mluc_478,
Monodelphis domestica ENSMODG00000010209 within_species_paralog 1 retrogene
retro_mdom_341,
Mus musculus ENSMUSG00000020390 ortholog_one2one 1 retrogene
retro_mmus_736,
Ochotona princeps ENSOPRG00000006668 ortholog_one2one 1 retrogene
retro_opri_1186,
Pteropus vampyrus ENSPVAG00000012430 ortholog_one2one 1 retrogene
retro_pvam_141,
Sarcophilus harrisii ENSSHAG00000016143 ortholog_one2many 2 retrogenes
retro_shar_12, retro_shar_173,
Tupaia belangeri ENSTBEG00000010294 ortholog_one2one 26 retrogenes
retro_tbel_2107, retro_tbel_2133, retro_tbel_2137, retro_tbel_2157, retro_tbel_2285, retro_tbel_2286, retro_tbel_2287, retro_tbel_2288, retro_tbel_2385, retro_tbel_2616, retro_tbel_2945, retro_tbel_3251, retro_tbel_3252, retro_tbel_3253, retro_tbel_3284, retro_tbel_3878, retro_tbel_4086, retro_tbel_4087, retro_tbel_4238, retro_tbel_4289, retro_tbel_4443, retro_tbel_4585, retro_tbel_4680, retro_tbel_4684, retro_tbel_4685, retro_tbel_4693,
Tarsius syrichta ENSTSYG00000011148 ortholog_one2one 2 retrogenes
retro_tsyr_151, retro_tsyr_553,
Tursiops truncatus ENSTTRG00000016861 ortholog_one2one 1 retrogene
retro_ttru_700,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_1218 81.19 65.13
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Download FASTA sequences of all ENSMODG00000014209 retrocopies