Parental gene: | ENSMODG00000002006 |
| Aliases: | None |
| Description: | None |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | 1:218748338..218788438(-) |
>ENSMODG00000002006
ATGGAGTCCATCTTCCACGAGAAACAAGAAGGCTCACTCTGTGCTCAGCATTGCCTGAATAATCTATTGCAAGGGGAATA
TTTTAGCCCTGTGGAATTATCCTCTATTGCTCATCAGCTAGATGAAGAAGAGAGGATGAGGATGGCAGAGGGAGGAATCA
CTAGTGAAGACTATAGAACATTTTTACAGCAACCTTCAGGAAATATGGATGACAGTGGTTTCTTCTCTATTCAAGTTATA
AGCAATGCCTTGAAAGTTTGGGGTTTAGAGCTAATCCTCTTCAACAGCCCAGAGTATCAGAGGCTCGGGATCGATCCTAT
AAATGAAAGATCATTTATATGCAATTATAAAGAACACTGGTTTACAGTTCGAAAATTAGGAAAACAGTGGTTTAACCTGA
ACTCTCTCTTGACGGGTCCAGAATTAATATCAGATACTTACCTTGCACTTTTCTTGGCTCAGTTACAACAGGAAGGTTAT
TCCATATTTGTTGTTAAGGGTGACCTACCAGACTGTGAAGCTGATCAGCTTCTGCAGATGATTCGAGTACAACAAATGCA
TAGACCAAAACTCATTGGAGAAGAATTAGCTCATCTAAAAGATCAAAGAATGCAGAAAATAGACCTAGATCAGTCTTTAG
AAGCAAGTCATCCGTATGACGGAACAGGAATGTTAGATGAAGATGAAGAGAATCTACAAAGAGCTCTAGCACTAAGTCGA
CAGGAAATCGATATGGAAGATGAAGAAGCAGATCTGCGAAGAGCAATTCGACTTAGTATGCAAGGTAGTTCCAGAAGTAG
TATTTCAGAAGATATTCCACAGACATCAGGTACAAATTCATCAGCATCTCTTTCTTCAGAAGAGCTACGAAAGAGAAGAG
AAGCCTACTTTGAAAAACAACAGCAGCCAGAACAGATTTCCCATCTACATGAAACACCAACTACAAGTGAAGATACACTT
GAAACTGATACAGGTGATGATATGACTGAAGAAGACATGCTTCAAGCTGCAATGAATATGTCTTTGGAAACTATAAGTGC
ATGA
ATGGAGTCCATCTTCCACGAGAAACAAGAAGGCTCACTCTGTGCTCAGCATTGCCTGAATAATCTATTGCAAGGGGAATA
TTTTAGCCCTGTGGAATTATCCTCTATTGCTCATCAGCTAGATGAAGAAGAGAGGATGAGGATGGCAGAGGGAGGAATCA
CTAGTGAAGACTATAGAACATTTTTACAGCAACCTTCAGGAAATATGGATGACAGTGGTTTCTTCTCTATTCAAGTTATA
AGCAATGCCTTGAAAGTTTGGGGTTTAGAGCTAATCCTCTTCAACAGCCCAGAGTATCAGAGGCTCGGGATCGATCCTAT
AAATGAAAGATCATTTATATGCAATTATAAAGAACACTGGTTTACAGTTCGAAAATTAGGAAAACAGTGGTTTAACCTGA
ACTCTCTCTTGACGGGTCCAGAATTAATATCAGATACTTACCTTGCACTTTTCTTGGCTCAGTTACAACAGGAAGGTTAT
TCCATATTTGTTGTTAAGGGTGACCTACCAGACTGTGAAGCTGATCAGCTTCTGCAGATGATTCGAGTACAACAAATGCA
TAGACCAAAACTCATTGGAGAAGAATTAGCTCATCTAAAAGATCAAAGAATGCAGAAAATAGACCTAGATCAGTCTTTAG
AAGCAAGTCATCCGTATGACGGAACAGGAATGTTAGATGAAGATGAAGAGAATCTACAAAGAGCTCTAGCACTAAGTCGA
CAGGAAATCGATATGGAAGATGAAGAAGCAGATCTGCGAAGAGCAATTCGACTTAGTATGCAAGGTAGTTCCAGAAGTAG
TATTTCAGAAGATATTCCACAGACATCAGGTACAAATTCATCAGCATCTCTTTCTTCAGAAGAGCTACGAAAGAGAAGAG
AAGCCTACTTTGAAAAACAACAGCAGCCAGAACAGATTTCCCATCTACATGAAACACCAACTACAAGTGAAGATACACTT
GAAACTGATACAGGTGATGATATGACTGAAGAAGACATGCTTCAAGCTGCAATGAATATGTCTTTGGAAACTATAAGTGC
ATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 78 .55 RPM |
| SRP007412_cerebellum | 50 .60 RPM |
| SRP007412_heart | 34 .49 RPM |
| SRP007412_kidney | 86 .91 RPM |
| SRP007412_liver | 74 .01 RPM |
| SRP007412_testis | 231 .60 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000005786 | ortholog_one2one | 2 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000005302 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000018025 | ortholog_one2many | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000010887 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000066427 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000020751 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000017126 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000006075 | ortholog_one2many | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000015316 | ortholog_one2one | 2 retrogenes | |
| Tupaia belangeri | ENSTBEG00000008099 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_1498 | 87.43 | 55.04 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mdom_1573 | 74.56 | 64.84 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMODG00000002006 retrocopies