Parental gene: | MMU.18258, ENSMMUG00000021233 |
| Aliases: | None |
| Description: | selenide, water dikinase 1 [Source:RefSeq peptide;Acc:NP_001177347] |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 9:13583550..13612280(-) |
>ENSMMUG00000021233
ATGTCTACGCGGGAGTCCTTTAACCCGGAAAGTTACGAATTGGACAAAAGCTTCCGGCTAACCAGATTCACTGAACTGAA
GGGCACAGGCTGCAAAGTGCCCCAAGATGTCCTGCAAAAATTGCTGGAATCTTTACAAGAGAACCACTTCCAAGAAGATG
AGCAGTTTCTGGGAGCCGTTATGCCAAGGCTTGGCATTGGAATGGATACTTGTGTCATTCCTTTGAGGCACGGTGGGCTT
TCCTTGGTTCAAACCACAGATTACATTTACCCGATCGTAGATGACCCTTACATGATGGGCAGGATAGCATGTGCCAATGT
CCTCAGTGACCTCTACGCAATGGGGGTCACGGAATGTGACAATATGCTGATGCTCCTTGGAGTCAGTAATAAAATGACTG
ACAGGGAAAGGGATAAAGTGATGCCTCTGATTATCCAAGGTTTTAAAGACGCAGCTGAGGAAGCAGGAACGTCTGTAACG
GGCGGCCAAACAGTACTAAACCCCTGGATTGTCCTGGGAGGAGTTGCTACCACTGTCTGTCAGCCCAATGAATTTATCAT
GCCGGACAATGCAGTACCAGGGGATGTGCTGGTGTTGACAAAACCCCTGGGGACACAGGTGGCAGTGGCTGTGCACCAGT
GGCTGGATATTCCTGAGAAATGGAATAAGATCAAACTAGTGGTCACCCAAGAAGATGTAGAGCTGGCCTACCAGGAGGCA
ATGATGAACATGGCGAGGCTCAACAGGACAGCTGCAGGACTCATGCACACATTCAATGCCCATGCGGCCACAGACATCAC
GGGCTTCGGGATTTTGGGCCATGCGCAGAACCTGGCCAAGCAGCAGAGGAACGAGGTGTCATTTGTAATTCACAACCTCC
CGGTGCTGGCCAAGATGGCTGCGGTGAGCAAGGCCTGTGGAAACATGTTCGGCCTCATGCACGGGACCTGCCCAGAGACC
TCAGGCGGCCTTCTGATCTGTTTACCACGTGAGCAAGCAGCTCGGTTCTGTGCAGAGATAAAGTCCCCCAAATATGGTGA
AGGCCACCAAGCATGGATTATTGGGATTGTAGAGAAGGGCAACCGCACAGCCAGAATCATAGACAAACCCCGGATCATCG
AGGTCGCACCACAAGTGGCCACTCAAAATGTGAATCCCACACCTGGGGCCACCTCTTAA
ATGTCTACGCGGGAGTCCTTTAACCCGGAAAGTTACGAATTGGACAAAAGCTTCCGGCTAACCAGATTCACTGAACTGAA
GGGCACAGGCTGCAAAGTGCCCCAAGATGTCCTGCAAAAATTGCTGGAATCTTTACAAGAGAACCACTTCCAAGAAGATG
AGCAGTTTCTGGGAGCCGTTATGCCAAGGCTTGGCATTGGAATGGATACTTGTGTCATTCCTTTGAGGCACGGTGGGCTT
TCCTTGGTTCAAACCACAGATTACATTTACCCGATCGTAGATGACCCTTACATGATGGGCAGGATAGCATGTGCCAATGT
CCTCAGTGACCTCTACGCAATGGGGGTCACGGAATGTGACAATATGCTGATGCTCCTTGGAGTCAGTAATAAAATGACTG
ACAGGGAAAGGGATAAAGTGATGCCTCTGATTATCCAAGGTTTTAAAGACGCAGCTGAGGAAGCAGGAACGTCTGTAACG
GGCGGCCAAACAGTACTAAACCCCTGGATTGTCCTGGGAGGAGTTGCTACCACTGTCTGTCAGCCCAATGAATTTATCAT
GCCGGACAATGCAGTACCAGGGGATGTGCTGGTGTTGACAAAACCCCTGGGGACACAGGTGGCAGTGGCTGTGCACCAGT
GGCTGGATATTCCTGAGAAATGGAATAAGATCAAACTAGTGGTCACCCAAGAAGATGTAGAGCTGGCCTACCAGGAGGCA
ATGATGAACATGGCGAGGCTCAACAGGACAGCTGCAGGACTCATGCACACATTCAATGCCCATGCGGCCACAGACATCAC
GGGCTTCGGGATTTTGGGCCATGCGCAGAACCTGGCCAAGCAGCAGAGGAACGAGGTGTCATTTGTAATTCACAACCTCC
CGGTGCTGGCCAAGATGGCTGCGGTGAGCAAGGCCTGTGGAAACATGTTCGGCCTCATGCACGGGACCTGCCCAGAGACC
TCAGGCGGCCTTCTGATCTGTTTACCACGTGAGCAAGCAGCTCGGTTCTGTGCAGAGATAAAGTCCCCCAAATATGGTGA
AGGCCACCAAGCATGGATTATTGGGATTGTAGAGAAGGGCAACCGCACAGCCAGAATCATAGACAAACCCCGGATCATCG
AGGTCGCACCACAAGTGGCCACTCAAAATGTGAATCCCACACCTGGGGCCACCTCTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 19 .12 RPM |
| SRP007412_brain | 10 .76 RPM |
| SRP007412_cerebellum | 17 .18 RPM |
| SRP007412_heart | 8 .72 RPM |
| SRP007412_kidney | 20 .30 RPM |
| SRP007412_liver | 30 .40 RPM |
| SRP007412_testis | 8 .33 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000013555 | possible_ortholog | 1 retrogene | |
| Canis familiaris | ENSCAFG00000004743 | possible_ortholog | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000009494 | ortholog_one2many | 2 retrogenes | |
| Dipodomys ordii | ENSDORG00000014119 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000014281 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000003921 | possible_ortholog | 1 retrogene | |
| Homo sapiens | ENSG00000086475 | ortholog_one2one | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000003806 | possible_ortholog | 2 retrogenes | |
| Loxodonta africana | ENSLAFG00000004670 | possible_ortholog | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000012188 | possible_ortholog | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000001971 | possible_ortholog | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000016864 | possible_ortholog | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000000948 | possible_ortholog | 1 retrogene | |
| Mus musculus | ENSMUSG00000026662 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000012205 | ortholog_one2one | 7 retrogenes | |
| Otolemur garnettii | ENSOGAG00000007807 | ortholog_one2one | 1 retrogene | |
| Procavia capensis | ENSPCAG00000015617 | possible_ortholog | 1 retrogene | |
| Pongo abelii | ENSPPYG00000002099 | possible_ortholog | 6 retrogenes | |
| Pan troglodytes | ENSPTRG00000002303 | ortholog_one2one | 3 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000002945 | possible_ortholog | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000018125 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000011114 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_922 | 89.31 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmul_1607 | 89.08 | 90.97 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmul_2495 | 77.73 | 58.16 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mmul_2647 | 93.89 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000021233 retrocopies