Parental gene:

ARPC5L, ENSMMUG00000020628

Aliases:None
Description:Actin-related protein 2/3 complex subunit 5 [Source:UniProtKB/TrEMBL;Acc:F7BM58]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:15:10870188..10875021(-)


>ENSMMUG00000020628
GGGGACATGCTTCGGGCATTCCATGCAGCCTTGCGGAACTCACCCGTCAACACCAAGAATCAAGCTGTGAAGGAGCGAGC
CCAGGGCGTGGTGCTGAAAGTGCTCACAAACTTCAAGAGCAGCGAGATTGAGCAGGCTGTGCAGTCACTGGACAGAAACG
GTGTTGACTTGTTAATGAAGTACATTTATAAAGGCTTTGAGAAGCCCACAGAAAATAGCAGTGCAGTGTTACTCCAGTGG
CACGAAAAGGCCTTAGCAGTAGGAGGACTAGGCTCCATTATAAGAGTTCTTACAGCAAGAAAGACTGTTTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 44 .82 RPM
SRP007412_brain 43 .48 RPM
SRP007412_cerebellum 23 .44 RPM
SRP007412_heart 22 .67 RPM
SRP007412_kidney 16 .55 RPM
SRP007412_liver 9 .46 RPM
SRP007412_testis 119 .94 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000016540 ortholog_one2one 1 retrogene
retro_amel_1798,
Callithrix jacchus ENSCJAG00000006730 ortholog_one2one 4 retrogenes
retro_cjac_1282, retro_cjac_1725, retro_cjac_2744, retro_cjac_3941,
Felis catus ENSFCAG00000028753 ortholog_one2one 1 retrogene
retro_fcat_1316,
Mustela putorius furo ENSMPUG00000013924 ortholog_one2one 1 retrogene
retro_mputfur_1532,
Oryctolagus cuniculus ENSOCUG00000002997 ortholog_one2one 1 retrogene
retro_ocun_518,
Procavia capensis ENSPCAG00000013936 ortholog_one2one 1 retrogene
retro_pcap_274,
Pan troglodytes ENSPTRG00000021362 ortholog_one2one 1 retrogene
retro_ptro_2185,
Rattus norvegicus ENSRNOG00000014317 ortholog_one2one 1 retrogene
retro_rnor_2730,
Ictidomys tridecemlineatus ENSSTOG00000007907 ortholog_one2one 2 retrogenes
retro_itri_275, retro_itri_767,
Tupaia belangeri ENSTBEG00000008398 ortholog_one2one 1 retrogene
retro_tbel_442,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_623 68.93 100.00
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2. retro_mmul_1650 71.84 100.00
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Download FASTA sequences of all ENSMMUG00000020628 retrocopies