Parental gene: | MMU.4381, ENSMMUG00000019016 |
| Aliases: | CFL1, cofilin-1 |
| Description: | cofilin-1 [Source:RefSeq peptide;Acc:NP_001253534] |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 14:8598344..8599783(+) |
>ENSMMUG00000019016
ATGAAGGTGCGTAAGTCTTCAACGCCAGAGGAGGTGAAGAAGCGCAAGAAGGCGGTGCTCTTCTGCCTGAGTGAGGACAA
GAAGAACATCATCCTGGAGGAGGGCAAGGAGATCTTGGTGGGCGATGTGGGCCAGACTGTCGACGACCCCTATGCCACCT
TTGTCAAGATGCTGCCAGACAAGGACTGCCGCTACGCCCTCTATGATGCAACCTATGAGACCAAGGAGAGCAAGAAGGAG
GACCTGGTGTTTATCTTCTGGGCCCCTGAGTGTGCGCCCCTTAAGAGCAAAATGATCTATGCCAGTTCCAAGGATGCCAT
CAAGAAGAAGCTGACAGGGATCAAGCATGAATTGCAAGCAAACTGCTACGAGGAAGTCAAGGACCGCTGCACCCTGGCAG
AGAAGTTGGGGGGCAGTGCTGTCATCTCCCTGGAGGGCAAGCCTTTGTGA
ATGAAGGTGCGTAAGTCTTCAACGCCAGAGGAGGTGAAGAAGCGCAAGAAGGCGGTGCTCTTCTGCCTGAGTGAGGACAA
GAAGAACATCATCCTGGAGGAGGGCAAGGAGATCTTGGTGGGCGATGTGGGCCAGACTGTCGACGACCCCTATGCCACCT
TTGTCAAGATGCTGCCAGACAAGGACTGCCGCTACGCCCTCTATGATGCAACCTATGAGACCAAGGAGAGCAAGAAGGAG
GACCTGGTGTTTATCTTCTGGGCCCCTGAGTGTGCGCCCCTTAAGAGCAAAATGATCTATGCCAGTTCCAAGGATGCCAT
CAAGAAGAAGCTGACAGGGATCAAGCATGAATTGCAAGCAAACTGCTACGAGGAAGTCAAGGACCGCTGCACCCTGGCAG
AGAAGTTGGGGGGCAGTGCTGTCATCTCCCTGGAGGGCAAGCCTTTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 401 .89 RPM |
| SRP007412_brain | 229 .48 RPM |
| SRP007412_cerebellum | 146 .26 RPM |
| SRP007412_heart | 71 .96 RPM |
| SRP007412_kidney | 130 .28 RPM |
| SRP007412_liver | 123 .58 RPM |
| SRP007412_testis | 82 .13 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000017334 | possible_ortholog | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000024955 | possible_ortholog | 6 retrogenes | |
| Callithrix jacchus | ENSCJAG00000001916 | possible_ortholog | 1 retrogene | |
| Equus caballus | ENSECAG00000019900 | possible_ortholog | 1 retrogene | |
| Felis catus | ENSFCAG00000013272 | possible_ortholog | 3 retrogenes | |
| Homo sapiens | ENSG00000172757 | possible_ortholog | 6 retrogenes | |
| Gorilla gorilla | ENSGGOG00000023183 | possible_ortholog | 5 retrogenes | |
| Myotis lucifugus | ENSMLUG00000024685 | possible_ortholog | 6 retrogenes | |
| Macaca mulatta | ENSMMUG00000013786 | within_species_paralog | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000011502 | possible_ortholog | 2 retrogenes | |
| Mus musculus | ENSMUSG00000056201 | possible_ortholog | 6 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000005852 | possible_ortholog | 5 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000025604 | possible_ortholog | 4 retrogenes | |
| Pongo abelii | ENSPPYG00000003047 | possible_ortholog | 5 retrogenes | |
| Pan troglodytes | ENSPTRG00000003895 | possible_ortholog | 5 retrogenes | |
| Rattus norvegicus | ENSRNOG00000020660 | possible_ortholog | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000027968 | possible_ortholog | 4 retrogenes | |
| Tupaia belangeri | ENSTBEG00000016751 | possible_ortholog | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000016931 | possible_ortholog | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_316 | 81.88 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmul_493 | 86.99 | 97.32 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmul_556 | 70.39 | 97.99 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mmul_667 | 78.67 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_mmul_705 | 82.02 | 59.06 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000019016 retrocopies