Parental gene:

CTDSPL2, ENSMMUG00000016742

Aliases:None
Description:CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 [Source:RefSeq peptide;Acc:NP_001253738]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:7:22832317..22938392(+)


>ENSMMUG00000016742
ATGAGGCTGAGAACACGGAAGGCTTCTCAGCAGTCAAATCAAATCCAAACACAACGCACTGCCAGAGCAAAGAGGAAATA
TTCAGAGGTTGATGATAGCCTGCCTTCAGGAGGAGAAAAACCATCGAAGAATGAAACCGGCTTGTTGTCTTCAATTAAAA
AATTTATTAAAGGAAGCACACCTAAGGAAGAGAGAGAAAATCCTTCAAAACGGAGTAGAATTGAACGTGATATAGATAAC
AATTTGATCACGTCAACACCAAGAGCAGGAGAAAAACCTAACAAACAGATATCTCGAGTAAGACGGAAAAGTCAAGTAAA
TGGAGAAGCTGGTAGTTATGAAATGACAAATCAACATGTAAAACAAAATGGAAAATTAGAAGATAATCCTTCCTCTGGCA
GTCCTCCAAGGACTACTTTGTTGGGGACCATATTTTCACCTGTCTTCAACTTTTTTTCACCAGCAAATAAAAATGGAACA
TCAGGATCAGATTCTCCAGGACAGGCTGTGGAAGCTGAAGAAATAGTAAAACAACTTGATATGGAACAGGTGGATGAGAT
CACTACCAGTACTACTACATCAACTAATGGAGCAGCTTACTCAAATCAAGCAGTTCAAGTGAGACCATCAATAAACAATG
GTTTAGAAGAAGCAGAAGAAACAGTTAATCGTGATATCCCACCCCTTACAGCACCAGTAACTCCAGATAGTGGTTACTCA
TCAGCCCATGCGGAGGCCACCTATGAAGAAGACTGGGAAGTATTTGACCCCTATTATTTCATCAAACATGTCCCGCCACT
GACAGAAGAACAACTAAATAGGAAACCTGCTCTTCCATTGAAAACAAGAAGCACACCGGAATTCTCCCTAGTTTTAGACT
TGGATGAAACACTAGTGCACTGTAGTCTAAATGAGCTAGAAGATGCAGCACTTACTTTTCCAGTCCTTTTCCAAGATGTC
ATTTATCAGGTTTATGTGAGATTAAGACCATTTTTCAGGGAATTCCTGGAACGAATGTCTCAGATGTATGAGATCATTCT
TTTTACTGCTTCTAAGAAGGTGTATGCAGACAAGTTACTGAACATACTAGACCCTAAAAAGCAACTGGTCAGGCACCGGC
TTTTCCGTGAACATTGTGTTTGTGTACAAGGAAACTATATAAAGGACTTAAATATTCTTGGAAGAGATCTTTCAAAAACT
ATAATAATTGACAACTCACCACAAGCCTTTGCATATCAGCTTTCTAATGGAATCCCTATAGAAAGTTGGTTTATGGATAA
AAATGACAATGAACTCCTAAAATTGATTCCATTCCTGGAGAAGCTTGTAGAACTGAATGAAGATGTTCGACCACACATCA
GAGACAGATTTCGCTTGCATGATTTGCTGCCCCCAGATTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 10 .31 RPM
SRP007412_brain 18 .26 RPM
SRP007412_cerebellum 24 .80 RPM
SRP007412_heart 6 .24 RPM
SRP007412_kidney 9 .74 RPM
SRP007412_liver 3 .44 RPM
SRP007412_testis 22 .92 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000002423 ortholog_one2one 1 retrogene
retro_cjac_4201,
Homo sapiens ENSG00000137770 ortholog_one2one 1 retrogene
retro_hsap_4881,
Macaca mulatta ENSMMUG00000005321 within_species_paralog 2 retrogenes
retro_mmul_2208, retro_mmul_764,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_2621 79.85 56.01
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Download FASTA sequences of all ENSMMUG00000016742 retrocopies