Parental gene:

ENSMMUG00000016635

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:20:67716702..67718304(+)


>ENSMMUG00000016635
CGGGTGTACTATGTGAGTGAGAAGATTATGAAGCTGGCCGCTAATATCTCCGGGGACAAGCTGGTGTCGCTGGGGACCTG
CTTTGGAAAATTCACTAAAACCCACAAGTTTCGGTTGCACGTCACAGCCCTGGATTACCTTGCACCTTATGCCAAGTATA
AAGTGTGGATAAAGCCTGGTGCAGAGCAGTCATTCCTGTATGGGAACCATGTGTTGAAATCTGGTCTGGGTCGAATCACT
GAAAATACTTCTCAGTACCAGGGCGTGGTGGTGTACTCCATGGCAGACATCCCTTTGGGTTTTGGGGTGGCAGCAAAATC
TACACAAGACTGCAGAAAAGTAGACCCCATGGCGATTGTGGTATTTCATCAGGCAGACGTTGGGGAATATGTGCGGCATG
AAGAGACGTTGACTTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 3 .81 RPM
SRP007412_brain 3 .36 RPM
SRP007412_cerebellum 1 .81 RPM
SRP007412_heart 2 .30 RPM
SRP007412_kidney 3 .17 RPM
SRP007412_liver 2 .38 RPM
SRP007412_testis 9 .95 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000007542 ortholog_one2many 1 retrogene
retro_amel_938,
Bos taurus ENSBTAG00000001666 ortholog_one2many 1 retrogene
retro_btau_353,
Canis familiaris ENSCAFG00000029835 ortholog_one2many 2 retrogenes
retro_cfam_1346, retro_cfam_1682,
Callithrix jacchus ENSCJAG00000015364 ortholog_one2many 2 retrogenes
retro_cjac_2466, retro_cjac_4212,
Dasypus novemcinctus ENSDNOG00000006821 ortholog_one2many 2 retrogenes
retro_dnov_2114, retro_dnov_74,
Homo sapiens ENSG00000132603 ortholog_one2many 2 retrogenes
retro_hsap_2707, retro_hsap_3648,
Gorilla gorilla ENSGGOG00000022785 ortholog_one2many 2 retrogenes
retro_ggor_1886, retro_ggor_2464,
Microcebus murinus ENSMICG00000009664 ortholog_many2many 1 retrogene
retro_mmur_5,
Myotis lucifugus ENSMLUG00000011835 ortholog_one2many 3 retrogenes
retro_mluc_1119, retro_mluc_2171, retro_mluc_2508,
Monodelphis domestica ENSMODG00000002782 ortholog_one2many 2 retrogenes
retro_mdom_1011, retro_mdom_1709,
Mus musculus ENSMUSG00000031917 ortholog_one2many 2 retrogenes
retro_mmus_1858, retro_mmus_2281,
Nomascus leucogenys ENSNLEG00000005492 ortholog_one2many 2 retrogenes
retro_nleu_1579, retro_nleu_510,
Oryctolagus cuniculus ENSOCUG00000017652 ortholog_one2many 5 retrogenes
retro_ocun_1013, retro_ocun_1262, retro_ocun_1292, retro_ocun_491, retro_ocun_721,
Otolemur garnettii ENSOGAG00000008066 ortholog_one2many 2 retrogenes
retro_ogar_1619, retro_ogar_2453,
Pongo abelii ENSPPYG00000007503 ortholog_one2many 2 retrogenes
retro_pabe_2258, retro_pabe_2995,
Pan troglodytes ENSPTRG00000008279 ortholog_one2many 2 retrogenes
retro_ptro_1828, retro_ptro_2473,
Rattus norvegicus ENSRNOG00000020391 ortholog_one2many 8 retrogenes
retro_rnor_1279, retro_rnor_1566, retro_rnor_1567, retro_rnor_1674, retro_rnor_1676, retro_rnor_485, retro_rnor_655, retro_rnor_865,
Sorex araneus ENSSARG00000000303 ortholog_one2many 1 retrogene
retro_sara_665,
Ictidomys tridecemlineatus ENSSTOG00000012871 ortholog_one2many 1 retrogene
retro_itri_1368,
Tursiops truncatus ENSTTRG00000010012 ortholog_one2many 2 retrogenes
retro_ttru_1783, retro_ttru_676,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_192 92.75 100.00
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2. retro_mmul_1801 70.43 82.61
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Download FASTA sequences of all ENSMMUG00000016635 retrocopies