Parental gene: | CCDC117, ENSMMUG00000007214 |
| Aliases: | None |
| Description: | coiled-coil domain containing 117 [Source:HGNC Symbol;Acc:26599] |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 10:72603706..72618786(+) |
>ENSMMUG00000007214
ATGGCTACGCTCGGCCGGCCCTTCGGCGGCCTCCCTCTGAGCGGCAGCTCGGACTTCCTGCAGCCGCCGCCGCAGCCGGC
CTTCCCTGGTCGGGCCTTCCCGCCAGGGGCTGACGGCGCCGACTTGGCCCCGCGGTCGGGACCCCGCGCAGTCCCTAGCA
GCCCCGCCGGGAGTGCGGCGCGCGGACGTGTTTCTGTTCACTGTAAAAAGAAACACAAGCGAGAGGAGGAGGATGATGAT
TGTCCAGTAAGAAAGAAAAGGATAACTGAAGCAGAGCTCTGTGCTGGTCCTAATGACTGGATTCTTTGTGCACATCAGGA
TGTAGAGGGGCATGGAGTAAATCCCTGCATTAGTGGCCTTTCCGTACCTGGGATATTAGATGTTATTTGTGAAGAAATGG
ATCAGACAACTGGAGAACCACAGTGTGAAGTTGCCCGAAGGAAGCTTCAAGAGATTGAGGACAGGATAATTGATGAAGAT
GAAGAAGTTGAAGCTGACAGAAATGTTAACCATCTCCCCAGTCTTGTCCTTTCTGATACCATGAAAACAGGTTTGAAGAG
GGAATTTGATGAAGTTTTTACAAAGAAAATGATTGAGTCTATGAGCCGTCCTTCCATGGAGCTTGTTCTCTGGAAACCCC
TCCCTGAACTCCTTTCTGATAAGCCAAAGCCATCCTCTAATACTAAGAACTATACAGGAGAGAGCCAAGCTAAGCATGCA
GCTGCTGGCACTGCCTTCCCTCAGAGAACTGAACTGTTCTTGGAACCTCGGCAACCAGGGATGTCTCTTTATAATAGTTT
GGAGACAGCTACTAGCACAGAAGAAGAGATGGAACTCTAG
ATGGCTACGCTCGGCCGGCCCTTCGGCGGCCTCCCTCTGAGCGGCAGCTCGGACTTCCTGCAGCCGCCGCCGCAGCCGGC
CTTCCCTGGTCGGGCCTTCCCGCCAGGGGCTGACGGCGCCGACTTGGCCCCGCGGTCGGGACCCCGCGCAGTCCCTAGCA
GCCCCGCCGGGAGTGCGGCGCGCGGACGTGTTTCTGTTCACTGTAAAAAGAAACACAAGCGAGAGGAGGAGGATGATGAT
TGTCCAGTAAGAAAGAAAAGGATAACTGAAGCAGAGCTCTGTGCTGGTCCTAATGACTGGATTCTTTGTGCACATCAGGA
TGTAGAGGGGCATGGAGTAAATCCCTGCATTAGTGGCCTTTCCGTACCTGGGATATTAGATGTTATTTGTGAAGAAATGG
ATCAGACAACTGGAGAACCACAGTGTGAAGTTGCCCGAAGGAAGCTTCAAGAGATTGAGGACAGGATAATTGATGAAGAT
GAAGAAGTTGAAGCTGACAGAAATGTTAACCATCTCCCCAGTCTTGTCCTTTCTGATACCATGAAAACAGGTTTGAAGAG
GGAATTTGATGAAGTTTTTACAAAGAAAATGATTGAGTCTATGAGCCGTCCTTCCATGGAGCTTGTTCTCTGGAAACCCC
TCCCTGAACTCCTTTCTGATAAGCCAAAGCCATCCTCTAATACTAAGAACTATACAGGAGAGAGCCAAGCTAAGCATGCA
GCTGCTGGCACTGCCTTCCCTCAGAGAACTGAACTGTTCTTGGAACCTCGGCAACCAGGGATGTCTCTTTATAATAGTTT
GGAGACAGCTACTAGCACAGAAGAAGAGATGGAACTCTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 11 .74 RPM |
| SRP007412_brain | 17 .14 RPM |
| SRP007412_cerebellum | 25 .57 RPM |
| SRP007412_heart | 9 .36 RPM |
| SRP007412_kidney | 8 .69 RPM |
| SRP007412_liver | 8 .31 RPM |
| SRP007412_testis | 27 .33 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000020088 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000004228 | ortholog_one2one | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000011845 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_2580 | 76.06 | 50.54 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000007214 retrocopies