Parental gene: | MMU.9732, ENSMMUG00000003795 |
| Aliases: | None |
| Description: | None |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 15:9006710..9362104(+) |
>ENSMMUG00000003795
ATGCCGGTCGTCCGGAAGATTTTCCGCCGCCGCCGGGGCGACTCGGAGTCAGAGGAAGATGAGCAGGACTCAGAGGAGGT
TCGATTAAAACTGGAAGAGACCAGAGAGGTACAGAACTTGAGGAAGAGGCCCAACGGGGTGAGTGCTGTGGCCCTGCTGG
TGGGAGAGAAGGTACAAGAGGAGACAACTCTAGTGGATGATCCCTTTCAGATGAAGACAGGTGGTATGGTGGATATGAAG
AAACTGAAGGAAAGGGGCAAAGATAAGATCAGTGAAGAGGAGGACCTGCACCTGGGGACATCGTTTTCTGCAGAAACCAA
CAGACGGGATGAGGATGCAGACATGATGAAGTACATTGAGACAGAGCTAAAGAAGAGGAAAGGGATCGTGGAACATGAGG
AACAGAAAGTTAAGCCAAAGAATGCAGAGGATTGTCTTTATGAACTTCCCGAAAACATCCGTGTTTCCTCAGCAAAGAAG
ACCGAGGAAATGCTTTCCAACCAGATGCTGAGTGGCATTCCTGAGGTGGACCTGGGCATCGATGCTAAAATTAAAAATAT
AATTTCCACGGAGGATGCCAAGGCCCGTCTGCTGGCAGAGCAGCAGAACAAGAAGAAAGACAGCGAGACCTCCTTCGTGC
CTACCAACATGGCCGTGAATTACGTGCAGCACAACAGATTTTATCATGAAGAGCTCAACGCACCCATCCGGAGAAACAAA
GAAGAGCCCAAGGCCCGGCCCTTGAGAGTAGGCGACACGGAGAAGCCAGAGCCTGAGCGGTCCCCTCCTAACCGCAAGCG
TCCTGCTAACGAGAAGGCAACTGATGACTATCATTATGAGAAGTTCAAGAAAATGAATAGGCGGTACTGA
ATGCCGGTCGTCCGGAAGATTTTCCGCCGCCGCCGGGGCGACTCGGAGTCAGAGGAAGATGAGCAGGACTCAGAGGAGGT
TCGATTAAAACTGGAAGAGACCAGAGAGGTACAGAACTTGAGGAAGAGGCCCAACGGGGTGAGTGCTGTGGCCCTGCTGG
TGGGAGAGAAGGTACAAGAGGAGACAACTCTAGTGGATGATCCCTTTCAGATGAAGACAGGTGGTATGGTGGATATGAAG
AAACTGAAGGAAAGGGGCAAAGATAAGATCAGTGAAGAGGAGGACCTGCACCTGGGGACATCGTTTTCTGCAGAAACCAA
CAGACGGGATGAGGATGCAGACATGATGAAGTACATTGAGACAGAGCTAAAGAAGAGGAAAGGGATCGTGGAACATGAGG
AACAGAAAGTTAAGCCAAAGAATGCAGAGGATTGTCTTTATGAACTTCCCGAAAACATCCGTGTTTCCTCAGCAAAGAAG
ACCGAGGAAATGCTTTCCAACCAGATGCTGAGTGGCATTCCTGAGGTGGACCTGGGCATCGATGCTAAAATTAAAAATAT
AATTTCCACGGAGGATGCCAAGGCCCGTCTGCTGGCAGAGCAGCAGAACAAGAAGAAAGACAGCGAGACCTCCTTCGTGC
CTACCAACATGGCCGTGAATTACGTGCAGCACAACAGATTTTATCATGAAGAGCTCAACGCACCCATCCGGAGAAACAAA
GAAGAGCCCAAGGCCCGGCCCTTGAGAGTAGGCGACACGGAGAAGCCAGAGCCTGAGCGGTCCCCTCCTAACCGCAAGCG
TCCTGCTAACGAGAAGGCAACTGATGACTATCATTATGAGAAGTTCAAGAAAATGAATAGGCGGTACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 57 .91 RPM |
| SRP007412_brain | 55 .69 RPM |
| SRP007412_cerebellum | 43 .52 RPM |
| SRP007412_heart | 37 .16 RPM |
| SRP007412_kidney | 34 .51 RPM |
| SRP007412_liver | 17 .22 RPM |
| SRP007412_testis | 75 .76 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000019979 | possible_ortholog | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000013895 | ortholog_one2one | 3 retrogenes | |
| Callithrix jacchus | ENSCJAG00000020318 | ortholog_one2one | 3 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000019214 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000136819 | ortholog_one2one | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000013358 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000010524 | ortholog_one2many | 3 retrogenes | |
| Monodelphis domestica | ENSMODG00000006832 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000017658 | ortholog_one2one | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000009770 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000019685 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000021465 | ortholog_one2one | 3 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000012313 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_1460 | 71.61 | 52.94 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmul_1870 | 73.03 | 60.90 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000003795 retrocopies