Parental gene:

RPS2, ENSMICG00000012765

Aliases:None
Description:ribosomal protein S2 [Source:HGNC Symbol;Acc:10404]
Organism:Mouse Lemur (Microcebus murinus)
Coordinates:GeneScaffold_2228:12329..13288(-)


>ENSMICG00000012765
GCGTTTGTTGCCATCGGGGACTACAATGGCCACGTTGGTCTAGGTGTCAAGTGCTCCAAGGAGGTAGCCACTGCCATCCG
AGGGGCCATCATCCTGGCCAAGCTCTCCATAGTCCCCGTGCGGAGAGGTTACTGGGGGAACAAGATCGGCAAGCCCCACA
CTGTTCCTTGCAAGGTGACAGGCCGCTGTGGCTCTGTGCTGGTGCGTCTCATCCCTGCCCCTAGAGGAACTGGCATTGTC
TCAGCCCCTGTGCCCAAGAAGCTGCTGATGATGGCTGGTATCGATGACTGCTACACTTCTGCCAGGGGCTGCACTGCCAC
CCTGGGCAACTTCGCAAAGGCCACCTTCGATGCCATCTCCAAGACCTATAGCTATCTGACTCCTGACCTTTGGAAAGAGA
CAGTATTCACCAAGTCTCCCTACCAGGAATTCACCGACCATCTTGTCAAGACCCACACCAGAGTCTCTGTGCAGAGGACC
CAGGCTCCAGCTGTGGCTACCACATAG

Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000002549 ortholog_one2one 1 retrogene
retro_acar_57,
Callithrix jacchus ENSCJAG00000015267 possible_ortholog 15 retrogenes
retro_cjac_1482, retro_cjac_1585, retro_cjac_1609, retro_cjac_1712, retro_cjac_1964, retro_cjac_2201, retro_cjac_2255, retro_cjac_2284, retro_cjac_2361, retro_cjac_2493, retro_cjac_2620, retro_cjac_274, retro_cjac_317, retro_cjac_3741, retro_cjac_4194,
Felis catus ENSFCAG00000029191 possible_ortholog 6 retrogenes
retro_fcat_1245, retro_fcat_1328, retro_fcat_1606, retro_fcat_1610, retro_fcat_1737, retro_fcat_517,
Gorilla gorilla ENSGGOG00000009371 possible_ortholog 5 retrogenes
retro_ggor_129, retro_ggor_1391, retro_ggor_1428, retro_ggor_168, retro_ggor_390,
Monodelphis domestica ENSMODG00000016077 possible_ortholog 1 retrogene
retro_mdom_536,
Nomascus leucogenys ENSNLEG00000008877 possible_ortholog 1 retrogene
retro_nleu_2895,
Otolemur garnettii ENSOGAG00000010098 possible_ortholog 19 retrogenes
retro_ogar_1051, retro_ogar_1120, retro_ogar_1205, retro_ogar_1557, retro_ogar_1821, retro_ogar_1835, retro_ogar_1837, retro_ogar_1851, retro_ogar_2101, retro_ogar_2164, retro_ogar_2313, retro_ogar_2648, retro_ogar_2817, retro_ogar_2842, retro_ogar_2965, retro_ogar_3109, retro_ogar_3177, retro_ogar_3180, retro_ogar_794,
Sarcophilus harrisii ENSSHAG00000015213 possible_ortholog 5 retrogenes
retro_shar_186, retro_shar_288, retro_shar_456, retro_shar_525, retro_shar_783,
Tupaia belangeri ENSTBEG00000006726 ortholog_one2one 30 retrogenes
retro_tbel_1023, retro_tbel_1059, retro_tbel_1105, retro_tbel_1179, retro_tbel_129, retro_tbel_1444, retro_tbel_1545, retro_tbel_1615, retro_tbel_1622, retro_tbel_1786, retro_tbel_1910, retro_tbel_2294, retro_tbel_2749, retro_tbel_2786, retro_tbel_2973, retro_tbel_3179, retro_tbel_3314, retro_tbel_3509, retro_tbel_3523, retro_tbel_3682, retro_tbel_3701, retro_tbel_392, retro_tbel_4373, retro_tbel_463, retro_tbel_4674, retro_tbel_481, retro_tbel_586, retro_tbel_603, retro_tbel_639, retro_tbel_647,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmur_99 71.96 60.12
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2. retro_mmur_153 62.60 71.43
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3. retro_mmur_205 99.40 100.00
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4. retro_mmur_210 99.29 83.33
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5. retro_mmur_226 97.02 100.00
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6. retro_mmur_230 91.82 94.64
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7. retro_mmur_259 79.44 62.50
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8. retro_mmur_266 98.81 100.00
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9. retro_mmur_463 95.27 100.00
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10. retro_mmur_672 65.88 99.40
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11. retro_mmur_698 98.21 100.00
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12. retro_mmur_742 91.62 98.81
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13. retro_mmur_802 84.13 73.21
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14. retro_mmur_824 97.63 100.00
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15. retro_mmur_829 79.01 94.64
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16. retro_mmur_875 84.13 73.21
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17. retro_mmur_953 98.21 100.00
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18. retro_mmur_966 97.02 100.00
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19. retro_mmur_969 100.00 100.00
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20. retro_mmur_981 99.18 72.62
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21. retro_mmur_1192 74.29 60.12
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22. retro_mmur_1273 88.82 100.00
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23. retro_mmur_1283 78.40 93.45
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24. retro_mmur_1296 70.59 80.36
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25. retro_mmur_1407 100.00 100.00
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26. retro_mmur_1417 96.03 75.00
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27. retro_mmur_1440 89.24 94.05
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28. retro_mmur_1613 95.27 100.00
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Download FASTA sequences of all ENSMICG00000012765 retrocopies