Parental gene: | RPL4, ENSMICG00000004419 |
| Aliases: | None |
| Description: | ribosomal protein L4 [Source:HGNC Symbol;Acc:10353] |
| Organism: | Mouse Lemur (Microcebus murinus) |
| Coordinates: | GeneScaffold_869:692566..695733(-) |
>ENSMICG00000004419
GCTTGTGCTCGTCCACTGATATCGGTGTACTCCGAAAAGGGGGAGTCATCTGGCAAAAATGTCACTTTGCCTGCAGTCTT
CAAGGCTCCCATTCGACCAGATATTGTGAACTTCGTTCACACCAACTTGCGCAAAAACAACAGGCAGCCCTATGCTGTCA
GTGAATTAGCAGGTCATCAGACCAGTGCTGAGTCTTGGGGTACTGGCAGGGCTGTGGCTAGAATTCCCAGAGTTCGAGGT
GGTGGGACTCACCGTTCTGGCCAGGGTGCTTTTGGAAATATGTGTCGTGGGGGCCGCATGTTTGCACCAACCAAGACTTG
GCGTCGCTGGCACCGTAGAGTGAACACCACCCAAAAGCGGTATGCCATCTGCTCTGCCCTGGCTGCTTCAGCCTTACCAG
CACTGGTCATGTCTAAAGGTCATCGTATTGAGGAAGTTCCTGAACTTCCTTTGGTGGTCGAAGATAAAGTTGAAGGCTAC
AAGAAGACCAAAGAGGCTGTTTTACTTCTTAAGAAACTTAAAGCCTGGAATGATATCAAAAAGGTCTATGCCTCTCAGCG
AATGAGGGCTGGCAAGGGCAAAATGAGAAACCGTCGTCGTATCCAGCGCAGGGGACCTTGCATCATTTACAATGAAGACA
ATGGTATCATCAAGGCTTTCAGGAATATCCCTGGAATTACTCTGCTTAACGTAAGCAAGCTGAACATTTTGAAACTTGCT
CCTGGTGGACATGTGGGACGTTTCTGCATTTGGACTGAAAGTGCCTTCCGAAAGTTAGATGAATTATATGGCACTTGGCG
TAAAGCTGCTTCCCTCAAGAGCAACTACAACCTTCCCATGCACAAGATGATCAACACAGACCTTAGCAGAATCTTGAAAA
GCCCAGAAATTCAAAGAGCTCTTCGAGCACCACGCAAGAAGATTCATCGTAGGGTCCTAAAGAAGAATCCACTGAAAAAC
CTGAGAATCATGTTGAAGCTAAACCCATATGCAAAGACCATGCGCCGGAATACCATTCTTCGCCAGGCCAGGAATCACAA
ACTTCGGGTGGCTAAGGCAGCTGCAGCAGTACGGGCCAAATCAGATGAGAAGGGGGTTGCAGACAAAAAGCCTGTAGTAG
TGAAGAAAGGAAAAAAGCTTGTTGGTGTTAAGAAGCAGAAGAAGCCTTTGGTGGGAAAAAAGGCTGCCTCTACCAAGAAA
CCTGCAGCTGAAAAGAAGCCTGCAGAAAAGAAACCTACCACAGAAGAAAAGAAGCCTACTGCATAA
GCTTGTGCTCGTCCACTGATATCGGTGTACTCCGAAAAGGGGGAGTCATCTGGCAAAAATGTCACTTTGCCTGCAGTCTT
CAAGGCTCCCATTCGACCAGATATTGTGAACTTCGTTCACACCAACTTGCGCAAAAACAACAGGCAGCCCTATGCTGTCA
GTGAATTAGCAGGTCATCAGACCAGTGCTGAGTCTTGGGGTACTGGCAGGGCTGTGGCTAGAATTCCCAGAGTTCGAGGT
GGTGGGACTCACCGTTCTGGCCAGGGTGCTTTTGGAAATATGTGTCGTGGGGGCCGCATGTTTGCACCAACCAAGACTTG
GCGTCGCTGGCACCGTAGAGTGAACACCACCCAAAAGCGGTATGCCATCTGCTCTGCCCTGGCTGCTTCAGCCTTACCAG
CACTGGTCATGTCTAAAGGTCATCGTATTGAGGAAGTTCCTGAACTTCCTTTGGTGGTCGAAGATAAAGTTGAAGGCTAC
AAGAAGACCAAAGAGGCTGTTTTACTTCTTAAGAAACTTAAAGCCTGGAATGATATCAAAAAGGTCTATGCCTCTCAGCG
AATGAGGGCTGGCAAGGGCAAAATGAGAAACCGTCGTCGTATCCAGCGCAGGGGACCTTGCATCATTTACAATGAAGACA
ATGGTATCATCAAGGCTTTCAGGAATATCCCTGGAATTACTCTGCTTAACGTAAGCAAGCTGAACATTTTGAAACTTGCT
CCTGGTGGACATGTGGGACGTTTCTGCATTTGGACTGAAAGTGCCTTCCGAAAGTTAGATGAATTATATGGCACTTGGCG
TAAAGCTGCTTCCCTCAAGAGCAACTACAACCTTCCCATGCACAAGATGATCAACACAGACCTTAGCAGAATCTTGAAAA
GCCCAGAAATTCAAAGAGCTCTTCGAGCACCACGCAAGAAGATTCATCGTAGGGTCCTAAAGAAGAATCCACTGAAAAAC
CTGAGAATCATGTTGAAGCTAAACCCATATGCAAAGACCATGCGCCGGAATACCATTCTTCGCCAGGCCAGGAATCACAA
ACTTCGGGTGGCTAAGGCAGCTGCAGCAGTACGGGCCAAATCAGATGAGAAGGGGGTTGCAGACAAAAAGCCTGTAGTAG
TGAAGAAAGGAAAAAAGCTTGTTGGTGTTAAGAAGCAGAAGAAGCCTTTGGTGGGAAAAAAGGCTGCCTCTACCAAGAAA
CCTGCAGCTGAAAAGAAGCCTGCAGAAAAGAAACCTACCACAGAAGAAAAGAAGCCTACTGCATAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000005211 | ortholog_one2many | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000017309 | ortholog_one2many | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000003008 | ortholog_one2one | 6 retrogenes | |
| Callithrix jacchus | ENSCJAG00000007491 | ortholog_one2many | 2 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000006693 | ortholog_one2one | 3 retrogenes | |
| Equus caballus | ENSECAG00000023179 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000000337 | ortholog_one2many | 3 retrogenes | |
| Felis catus | ENSFCAG00000012293 | ortholog_one2many | 4 retrogenes | |
| Homo sapiens | ENSG00000174444 | ortholog_one2one | 5 retrogenes | |
| Gorilla gorilla | ENSGGOG00000003695 | ortholog_one2many | 4 retrogenes | |
| Loxodonta africana | ENSLAFG00000006494 | ortholog_one2one | 3 retrogenes | |
| Myotis lucifugus | ENSMLUG00000011809 | ortholog_one2many | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000016844 | ortholog_one2many | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000009657 | ortholog_one2one | 2 retrogenes | |
| Mustela putorius furo | ENSMPUG00000000337 | ortholog_one2many | 3 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000012938 | ortholog_one2one | 4 retrogenes | |
| Pongo abelii | ENSPPYG00000006578 | ortholog_one2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000007195 | ortholog_one2one | 6 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000000068 | ortholog_one2one | 18 retrogenes | |
| Rattus norvegicus | ENSRNOG00000009378 | possible_ortholog | 5 retrogenes | |
| Sus scrofa | ENSSSCG00000004945 | ortholog_one2one | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000009221 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000014392 | ortholog_one2one | 9 retrogenes | |
| Tarsius syrichta | ENSTSYG00000005588 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000010206 | ortholog_one2one | 7 retrogenes | |
| Vicugna pacos | ENSVPAG00000006746 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmur_440 | 76.28 | 87.17 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmur_562 | 91.94 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmur_830 | 94.02 | 55.58 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mmur_852 | 90.52 | 94.54 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_mmur_1050 | 91.42 | 62.71 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_mmur_1330 | 75.28 | 64.37 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMICG00000004419 retrocopies