Parental gene:

PGGT1B, ENSLAFG00000003752

Aliases:None
Description:None
Organism:Elephant (Loxodonta africana)
Coordinates:scaffold_1:48952293..49037286(+)


>ENSLAFG00000003752
AGCATGGCGGCCACGGAGGACGAGCAGTCGGCGGGGAGCAGTGAGGGAGAGCGGCTGGATTTCCTACGTGATCGACATGT
GCGGTTCTTCCAGCGTTGCCTCCAGGTCTTGCCGGAGCGTTATTCTTCGCTTGAGACCAGCAGGTTGACAATTGCATTTT
TTGCGCTTTCCGGGTTGGATATGTTGGATTCCTTAGATGTGGTGAACAAAGATGACATAATAGAGTGGATTTACTCCCTG
CAAGTCCTTCCCACAGAAGACAGATCAAATTTAAATCGCTGTGGTTTCCGAGGCTCTTCATACCTGGGTATTCCATTCAA
TCCGTCAAAGAATCCTGGGACAGCTCATCCTTATGATAGTGGCCACATAGCAATGACCTACACTGGCCTTTCATGCTTAG
TTATTCTTGGAGACGACTTAAGCCGAGTAAATAAAGAAGCTTGCTTAGCAGGCTTGAGAGCCCTTCAGCTAGAAGATGGA
AGTTTTTGTGCTGTACCTGAAGGAAGTGAAAATGACATGCGGTTTGTGTACTGTGCTTCTTGTATTTGCTATATGCTCAA
CAACTGGTCAGGCATGGATGTGAAAAAAGCTATTGACTATATTAGAAGAAGTATGTCCTATGACAATGGACTGGCACAGG
GAGCTGGACTTGAATCTCATGGAGGATCGACATTTTGTGGCATTGCATCACTGTGTCTGATGGGTAAACTAGAAGAAGTT
TTTTCAGAAAAAGAATTGAACAGGATAAAGAGGTGGTGTATAATGAGGCAACAAAATGGTTATCATGGAAGACCTAATAA
GCCTGTAGACACCTGTTATTCTTTTTGGGTGGGAGCAACTCTAAAGCTTCTGAAAATTTTCCAGTATACTAACTTTGAGA
AAAACAGAAATTACATCTTATCAACTCAAGATCGCCTAGTAGGGGGATTTGCCAAGTGGCCAGATAGTCATCCAGATGCT
TTACATGCCTACTTTGGGATTTGTGGCCTGTCACTAATGGAGGAAAGTGGAATTTGTAAAGTACATCCTGCCCTGAATGT
AAGCACACGGACTTCTGAACGCCTTCAAGATCTCCACCAGAGTTGGAAAGCCCAGGACTCTAAACAATGTTCAGAAAATG
TACACATCTCCACA

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000016700 ortholog_one2one 1 retrogene
retro_cjac_1058,
Cavia porcellus ENSCPOG00000002443 ortholog_one2one 1 retrogene
retro_cpor_1344,
Homo sapiens ENSG00000164219 ortholog_one2one 2 retrogenes
retro_hsap_675, retro_hsap_698,
Pongo abelii ENSPPYG00000015694 ortholog_one2one 3 retrogenes
retro_pabe_527, retro_pabe_545, retro_pabe_640,
Pan troglodytes ENSPTRG00000017146 ortholog_one2one 2 retrogenes
retro_ptro_444, retro_ptro_487,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_lafr_668 67.57 76.46
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Download FASTA sequences of all ENSLAFG00000003752 retrocopies