Parental gene:

IDH1, ENSGGOG00000012619

Aliases:None
Description:Isocitrate dehydrogenase [NADP] [Source:UniProtKB/TrEMBL;Acc:G3RA53]
Organism:Gorilla (Gorilla gorilla)
Coordinates:2b:96899926..96920205(-)


>ENSGGOG00000012619
ATGTCCAAAAAAATCAGTGGCGGTTCTGTGGTAGAGATGCAAGGAGATGAAATGACACGAATCATTTGGGAATTGATTAA
AGAGAAACTCATTTTTCCCTATGTGGAATTGGATCTACGTAGCTATGATTTAGGCATAGAGAATCGTGATGCCACCAACG
ACCAAGTCACCAAGGATGCTGCAGAAGCTATAAAGAAATATAATGTTGGCGTCAAATGTGCCACTATCACTCCTGATGAG
AAGAGGGTTGAGGAGTTCAAGTTGAAACAAATGTGGAAATCACCAAATGGCACCATACGAAATATTCTGGGTGGCACGGT
CTTCAGAGAAGCCATTATCTGCAAAAATATCCCCCGGCTTGTGAGTGGATGGGTAAAACCTATCATCATAGGTCGTCATG
CTTATGGGGATCAATACAGAGCAACTGATTTTGTTGTTCCTGGGCCTGGAAAAGTAGAGATAACCTACACACCAAGTGAC
GGAACCCAAAAGGTGACATACCTGGTACATAACTTTGAAGAGGGTGGTGGTGTTGCCATGGGGATGTATAATCAAGATAA
GTCAATTGAAGATTTTGCACACAGTTCCTTCCAAATGGCTCTGTCTAAGAGTTGGCCTTTGTATCTGAGCACCAAAAACA
CTATTCTGAAGAAATATGATGGGCGTTTTAAAGACATCTTTCAGGAGATATATGACAAGCAGTACAAGTCCCAGTTTGAA
GCCCAAAAGATCTGGTATGAGCATAGACTCATCGACGACATGGTGGCCCAAGCTATGAAATCAGAGGGAGGCTTCATCTG
GGCCTGTAAAAACTATGATGGTGATGTGCAGTCGGACTCTGTGGCCCAAGGGTATGGCTCTCTCGGGATGATGACCAGCG
TGCTGGTTTGTCCAGATGGCAAGACAGTAGAAGCAGAGGCTGCCCACGGGACTGTAACCCGTCACTACCGCATGTACCAG
AAAGGACAGGAGACGTCCACCAATCCCATTGCTTCCATTTTTGCCTGGACCAGAGGGTTAGCCCACAGAGCAAAGCTTGA
TAACAATAAAGAGCTTGCCTTCTTTGCAAATGCTTTGGAAGAAGTCTCTGTTGAGACAATTGAGGCTGGCTTCATGACCA
AGGACTTGGCTGCTTGCATTAAAGGTTTACCCAATGTGCAACGTTCTGATTACTTGAATACATTTGAGTTCATGGATAAA
CTTGGAGAAAACTTGAAGATCAAACTAGCTCAGGCCAAACTTTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 19 .71 RPM
SRP007412_cerebellum 14 .38 RPM
SRP007412_heart 7 .97 RPM
SRP007412_kidney 138 .37 RPM
SRP007412_liver 154 .68 RPM
SRP007412_testis 211 .86 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000020527 ortholog_one2one 1 retrogene
retro_btau_1235,
Choloepus hoffmanni ENSCHOG00000004574 ortholog_one2one 2 retrogenes
retro_chof_2158, retro_chof_897,
Cavia porcellus ENSCPOG00000013587 ortholog_one2one 1 retrogene
retro_cpor_1010,
Homo sapiens ENSG00000138413 ortholog_one2one 1 retrogene
retro_hsap_3554,
Microcebus murinus ENSMICG00000009797 ortholog_one2one 1 retrogene
retro_mmur_1364,
Macaca mulatta ENSMMUG00000016077 ortholog_one2one 1 retrogene
retro_mmul_1817,
Nomascus leucogenys ENSNLEG00000007143 ortholog_one2one 3 retrogenes
retro_nleu_1169, retro_nleu_2328, retro_nleu_3117,
Otolemur garnettii ENSOGAG00000014848 ortholog_one2one 4 retrogenes
retro_ogar_1488, retro_ogar_2270, retro_ogar_2925, retro_ogar_3057,
Pongo abelii ENSPPYG00000013125 ortholog_one2one 2 retrogenes
retro_pabe_2935, retro_pabe_926,
Pan troglodytes ENSPTRG00000012865 ortholog_one2one 1 retrogene
retro_ptro_2415,
Sus scrofa ENSSSCG00000023264 ortholog_one2one 1 retrogene
retro_sscr_549,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_2400 89.15 51.21
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Download FASTA sequences of all ENSGGOG00000012619 retrocopies