Parental gene: | TOMM40L, ENSGGOG00000005720 |
| Aliases: | None |
| Description: | None |
| Organism: | Gorilla (Gorilla gorilla) |
| Coordinates: | 1:140318403..140322994(+) |
>ENSGGOG00000005720
ATGGGGAACACATTGGGTCTGGCACCAATGGGGACTTTGCCCCGCCGGAGCCCCCGCCGAGAGGAACCCCTGCCCAACCC
TGGGAGCTTCGATGAGCTGCACCGGCTATGCAAAGATGTATTCCCAGCACAGATGGAGGGCGTGAAGCTCGTTGTCAACA
AGGTTCTGAGCAGCCATTTCCAGGTGGCGCACACTATACACATGAGTGCCCTGGGCTTGCCGGGATATCACCTCCATGCG
GCCTATGCAGGGGATTGGCAGCTCAGTCCCACTGAGGTGTTCCCCACTGTGGTAGGGGATATGGACAGCAGTGGCAGCCT
GAACGCCCAGGTCTTGCTCCTCTTGGCAGAGCGGCTCCGAGCTAAGGCTGTCTTCCAGACGCAGCAGGCCAAGTTCTTGA
CATGGCAGTTTGATGGCGAGTATCGGGGAGATGACTACACAGCCACTCTGACCCTAGGAAATCCTGACCTGATTGGGGAG
TCGGTGATCATGGTTGCTCACTTCCTGCAGAGCCTCACTCATCGGCTGGTGCTGGGAGGAGAGCTAGTTTATCACCGGCG
GCCAGGCGAAGAGGGGGCCATCTTGACACTGGCTGGGAAGTACTCGGCTGTACACTGGGTAGCTACATTGAATGTGGGAT
CAGGCGGGGCCCATGCAAGTTACTATCACAGGGCAAATGAACAGGTTCAGGTTGGAGTGGAGTTTGAGGCAAACACAAGG
CTACAAGACACAACATTCTCCTTTGGTTACCACCTGACTCTGCCCCAGGCCAACATGGTATTTAGAGGCTTGGTGGATAG
TAACTGGTGTGTAGGTGCTGTGCTGGAGAAGAAGATGCCCCCTCTGCCTGTCACCCTAGCCCTTGGAGCCTTCCTCAATC
ACTGGCGCAACAGATTCCACTGTGGCTTCAGCATCACTGTGGGCTGA
ATGGGGAACACATTGGGTCTGGCACCAATGGGGACTTTGCCCCGCCGGAGCCCCCGCCGAGAGGAACCCCTGCCCAACCC
TGGGAGCTTCGATGAGCTGCACCGGCTATGCAAAGATGTATTCCCAGCACAGATGGAGGGCGTGAAGCTCGTTGTCAACA
AGGTTCTGAGCAGCCATTTCCAGGTGGCGCACACTATACACATGAGTGCCCTGGGCTTGCCGGGATATCACCTCCATGCG
GCCTATGCAGGGGATTGGCAGCTCAGTCCCACTGAGGTGTTCCCCACTGTGGTAGGGGATATGGACAGCAGTGGCAGCCT
GAACGCCCAGGTCTTGCTCCTCTTGGCAGAGCGGCTCCGAGCTAAGGCTGTCTTCCAGACGCAGCAGGCCAAGTTCTTGA
CATGGCAGTTTGATGGCGAGTATCGGGGAGATGACTACACAGCCACTCTGACCCTAGGAAATCCTGACCTGATTGGGGAG
TCGGTGATCATGGTTGCTCACTTCCTGCAGAGCCTCACTCATCGGCTGGTGCTGGGAGGAGAGCTAGTTTATCACCGGCG
GCCAGGCGAAGAGGGGGCCATCTTGACACTGGCTGGGAAGTACTCGGCTGTACACTGGGTAGCTACATTGAATGTGGGAT
CAGGCGGGGCCCATGCAAGTTACTATCACAGGGCAAATGAACAGGTTCAGGTTGGAGTGGAGTTTGAGGCAAACACAAGG
CTACAAGACACAACATTCTCCTTTGGTTACCACCTGACTCTGCCCCAGGCCAACATGGTATTTAGAGGCTTGGTGGATAG
TAACTGGTGTGTAGGTGCTGTGCTGGAGAAGAAGATGCCCCCTCTGCCTGTCACCCTAGCCCTTGGAGCCTTCCTCAATC
ACTGGCGCAACAGATTCCACTGTGGCTTCAGCATCACTGTGGGCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 26 .85 RPM |
| SRP007412_cerebellum | 15 .84 RPM |
| SRP007412_heart | 11 .04 RPM |
| SRP007412_kidney | 17 .83 RPM |
| SRP007412_liver | 20 .39 RPM |
| SRP007412_testis | 4 .14 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Erinaceus europaeus | ENSEEUG00000004808 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000015755 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000023033 | within_species_paralog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000013733 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000003800 | ortholog_one2one | 2 retrogenes | |
| Drosophila melanogaster | FBgn0016041 | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ggor_1075 | 59.82 | 71.75 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ggor_1761 | 59.93 | 88.31 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSGGOG00000005720 retrocopies