Parental gene: | TFDP1, ENSGGOG00000004908 |
| Aliases: | None |
| Description: | None |
| Organism: | Gorilla (Gorilla gorilla) |
| Coordinates: | 13:96826154..96881775(+) |
>ENSGGOG00000004908
ATGGCAAAAGATGCCGGTCTAATTGAAGCCAACGGAGAACTCAAGGTCTTCATAGACCAGAACCTTAGTCCCGGGAAAGG
CGTGGTGTCCCTCGTGGCCGTTCACCCCTCCACCGTCAACCCGCTCGGGAAGCAGCTCTTGCCAAAAACCTTTGGACAGT
CCAATGTCAACATTGCCCAGCAAGTGGTAATTGGTACGCCTCAGAGACCGGCAGCGTCAAACACCCTGGTGGTAGGAAGC
CCACACACCCCCAGCACTCACTTTGCCTCTCAGAACCAGCCTTCCGACTCCTCACCTTGGTCTGCCGGGAAACGCAACAG
GAAAGGAGAGAAGAATGGCAAGGGCCTGCGGCATTTCTCCATGAAGGTCTGCGAGAAGGTGCAGAGGAAAGGGACCACTT
CCTACAACGAAGTGGCGGACGAGCTGGTTGCGGAGTTCAGTGCTGCTGACAACCACATCTTACCAAACGAGTCAGCTTAT
GACCAGAAAAACATAAGACGGCGCGTCTACGATGCCTTAAACGTGCTAATGGCCATGAACATCATCTCCAAGGAGAAGAA
GGAGATCAAGTGGATTGGTCTGCCCACCAACTCGGCTCAGGAATGTCAGAACTTAGAGGTGGAAAGACAGAGGAGACTTG
AAAGAATAAAACAGAAACAGTCTCAACTTCAAGAACTTATTCTACAGCAAATTGCCTTCAAGAACCTGGTGCAGAGAAAC
CGGCATGCGGAGCAGCAGGCCAGCCGGCCACCGCCACCCAACTCAGTCATCCACCTGCCCTTCATCATCGTCAACACCAG
CAAGAAGACGGTCATCGACTGCAGCATCTCCAATGACAAATTTGAGTATCTGTTTAATTTTGACAACACATTTGAAATCC
ACGATGACATAGAAGTGCTGAAGCGGATGGGCATGGCTTGCGGGCTGGAGTCGGGGAGCTGCTCTGCCGAAGACCTTAAA
ATGGCCAGAAGTCTGGTCCCCAAGGCTCTGGAGCCGTACGTGACAGAAATGGCTCAGGGAACTGTTGGAGGCGTGTTCAT
CACGACGGCAGGTTCCACGTCTAACGGCACAAGGTTCTCTGCCAGTGACCTGACCAACGGTGCAGATGGGATGCTGGCCA
CAAGCTCCAATGGGTCTCAGTACAGCGGCTCCAGGGTGGAGACCCCGGTGTCCGCCTACTCCCAAGAAGAT
ATGGCAAAAGATGCCGGTCTAATTGAAGCCAACGGAGAACTCAAGGTCTTCATAGACCAGAACCTTAGTCCCGGGAAAGG
CGTGGTGTCCCTCGTGGCCGTTCACCCCTCCACCGTCAACCCGCTCGGGAAGCAGCTCTTGCCAAAAACCTTTGGACAGT
CCAATGTCAACATTGCCCAGCAAGTGGTAATTGGTACGCCTCAGAGACCGGCAGCGTCAAACACCCTGGTGGTAGGAAGC
CCACACACCCCCAGCACTCACTTTGCCTCTCAGAACCAGCCTTCCGACTCCTCACCTTGGTCTGCCGGGAAACGCAACAG
GAAAGGAGAGAAGAATGGCAAGGGCCTGCGGCATTTCTCCATGAAGGTCTGCGAGAAGGTGCAGAGGAAAGGGACCACTT
CCTACAACGAAGTGGCGGACGAGCTGGTTGCGGAGTTCAGTGCTGCTGACAACCACATCTTACCAAACGAGTCAGCTTAT
GACCAGAAAAACATAAGACGGCGCGTCTACGATGCCTTAAACGTGCTAATGGCCATGAACATCATCTCCAAGGAGAAGAA
GGAGATCAAGTGGATTGGTCTGCCCACCAACTCGGCTCAGGAATGTCAGAACTTAGAGGTGGAAAGACAGAGGAGACTTG
AAAGAATAAAACAGAAACAGTCTCAACTTCAAGAACTTATTCTACAGCAAATTGCCTTCAAGAACCTGGTGCAGAGAAAC
CGGCATGCGGAGCAGCAGGCCAGCCGGCCACCGCCACCCAACTCAGTCATCCACCTGCCCTTCATCATCGTCAACACCAG
CAAGAAGACGGTCATCGACTGCAGCATCTCCAATGACAAATTTGAGTATCTGTTTAATTTTGACAACACATTTGAAATCC
ACGATGACATAGAAGTGCTGAAGCGGATGGGCATGGCTTGCGGGCTGGAGTCGGGGAGCTGCTCTGCCGAAGACCTTAAA
ATGGCCAGAAGTCTGGTCCCCAAGGCTCTGGAGCCGTACGTGACAGAAATGGCTCAGGGAACTGTTGGAGGCGTGTTCAT
CACGACGGCAGGTTCCACGTCTAACGGCACAAGGTTCTCTGCCAGTGACCTGACCAACGGTGCAGATGGGATGCTGGCCA
CAAGCTCCAATGGGTCTCAGTACAGCGGCTCCAGGGTGGAGACCCCGGTGTCCGCCTACTCCCAAGAAGAT
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 23 .69 RPM |
| SRP007412_cerebellum | 35 .18 RPM |
| SRP007412_heart | 6 .91 RPM |
| SRP007412_kidney | 17 .09 RPM |
| SRP007412_liver | 11 .71 RPM |
| SRP007412_testis | 46 .21 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000004467 | ortholog_one2many | 8 retrogenes | |
| Callithrix jacchus | ENSCJAG00000006950 | ortholog_one2many | 2 retrogenes | |
| Homo sapiens | ENSG00000198176 | ortholog_one2one | 4 retrogenes | |
| Loxodonta africana | ENSLAFG00000007927 | ortholog_many2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000012165 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000007423 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000038482 | ortholog_one2many | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000000849 | ortholog_one2one | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000003532 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000025889 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ggor_17 | 94.71 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ggor_335 | 79.49 | 98.49 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSGGOG00000004908 retrocopies