Parental gene:

LAGE3, ENSG00000196976

Aliases:None
Description:L antigen family, member 3 [Source:HGNC Symbol;Acc:26058]
Organism:Human (Homo sapiens)
Coordinates:X:153706027..153707596(-)


>ENSG00000196976
ATGCGGGACGCGGATGCAGACGCAGGCGGAGGCGCTGACGGCGGGGATGGCCGGGGTGGCCACAGCTGCCGCGGGGGCGT
GGACACAGCCGCAGCTCCGGCCGGTGGAGCTCCCCCAGCGCACGCGCCAGGTCCGGGCAGAGACGCCGCGTCTGCGGCCA
GGGGGTCACGAATGCGGCCGCACATATTCACCCTCAGCGTGCCTTTCCCGACCCCCTTGGAGGCGGAAATCGCCCATGGG
TCCCTGGCACCAGATGCCGAGCCCCACCAAAGGGTGGTTGGGAAGGATCTCACAGTGAGTGGCAGGATCCTGGTCGTCCG
CTGGAAAGCTGAAGACTGTCGCCTGCTCCGAATTTCCGTCATCAACTTTCTTGACCAGCTTTCCCTGGTGGTGCGGACCA
TGCAGCGCTTTGGGCCCCCCGTTTCCCGCTAA

Library Parental gene expression (RPM)
bodymap2_liver 4 .08 RPM
bodymap2_lung 4 .15 RPM
bodymap2_breast 4 .28 RPM
bodymap2_adipose 3 .74 RPM
bodymap2_adrenal 5 .61 RPM
bodymap2_skeletal_muscle 5 .37 RPM
bodymap2_thyroid 4 .22 RPM
bodymap2_prostate 9 .04 RPM
bodymap2_colon 4 .93 RPM
bodymap2_testis 5 .47 RPM
bodymap2_brain 5 .06 RPM
bodymap2_heart 3 .90 RPM
bodymap2_white_blood_cells 6 .46 RPM
bodymap2_lymph_node 7 .20 RPM
bodymap2_ovary 9 .29 RPM
bodymap2_kidney 3 .83 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000024143 possible_ortholog 1 retrogene
retro_dnov_244,
Dipodomys ordii ENSDORG00000009093 ortholog_one2one 1 retrogene
retro_dord_448,
Gorilla gorilla ENSGGOG00000013507 ortholog_one2one 1 retrogene
retro_ggor_2845,
Macaca mulatta ENSMMUG00000007739 ortholog_one2one 1 retrogene
retro_mmul_1145,
Mus musculus ENSMUSG00000015289 ortholog_one2one 2 retrogenes
retro_mmus_1411, retro_mmus_1665,
Nomascus leucogenys ENSNLEG00000014285 ortholog_one2one 1 retrogene
retro_nleu_1373,
Ochotona princeps ENSOPRG00000003778 ortholog_one2one 2 retrogenes
retro_opri_196, retro_opri_549,
Pongo abelii ENSPPYG00000020881 ortholog_one2one 1 retrogene
retro_pabe_3394,
Rattus norvegicus ENSRNOG00000037249 ortholog_one2one 1 retrogene
retro_rnor_595,
Sus scrofa ENSSSCG00000025528 ortholog_one2many 1 retrogene
retro_sscr_94,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_4244 81.25 100.00
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Download FASTA sequences of all ENSG00000196976 retrocopies