Parental gene:

AAED1, ENSG00000158122

Aliases:None
Description:AhpC/TSA antioxidant enzyme domain containing 1 [Source:HGNC Symbol;Acc:16881]
Organism:Human (Homo sapiens)
Coordinates:9:99401858..99417585(-)


>ENSG00000158122
ATGGCCGCGCCGGCCCCGGTCACGCGGCAGGTTAGCGGCGCCGCCGCCCTGGTCCCGGCCCCGAGCGGCCCCGACAGCGG
GCAGCCCCTGGCGGCCGCCGTGGCCGAGCTGCCGGTGCTGGACGCCCGCGGGCAGCGGGTACCGTTCGGCGCGCTGTTCC
GGGAGCGCCGCGCCGTGGTGGTGTTCGTGCGGCATTTCCTGTGTTACATCTGCAAGGAATACGTAGAGGATCTGGCCAAA
ATCCCCAGGAGTTTCTTACAAGAAGCAAATGTCACCCTTATAGTGATTGGACAGTCATCCTACCATCATATTGAGCCTTT
TTGCAAGCTGACTGGATATTCTCATGAAATCTATGTCGATCCTGAGAGAGAAATTTATAAAAGATTGGGAATGAAAAGAG
GTGAAGAAATTGCTTCCTCAGGACAGAGCCCCCACATAAAATCAAATCTACTCTCAGGAAGCCTTCAGAGCCTGTGGCGG
GCAGTGACTGGCCCTCTCTTTGATTTTCAAGGAGACCCAGCTCAGCAAGGTGGAACCCTCATTTTAGGTCCAGGTAACAA
CATCCATTTTATACACCGCGATAGGAATAGGTTGGATCACAAACCTATCAACTCTGTTTTACAGCTTGTAGGAGTTCAGC
ATGTGAACTTTACAAACAGACCTTCAGTTATCCATGTGTGA

Library Parental gene expression (RPM)
bodymap2_liver 8 .70 RPM
bodymap2_lung 22 .98 RPM
bodymap2_breast 29 .94 RPM
bodymap2_adipose 49 .46 RPM
bodymap2_adrenal 28 .21 RPM
bodymap2_skeletal_muscle 45 .94 RPM
bodymap2_thyroid 24 .14 RPM
bodymap2_prostate 18 .98 RPM
bodymap2_colon 17 .21 RPM
bodymap2_testis 22 .93 RPM
bodymap2_brain 7 .34 RPM
bodymap2_heart 25 .73 RPM
bodymap2_white_blood_cells 23 .84 RPM
bodymap2_lymph_node 32 .66 RPM
bodymap2_ovary 25 .46 RPM
bodymap2_kidney 19 .67 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000006422 ortholog_one2many 1 retrogene
retro_chof_1792,
Choloepus hoffmanni ENSCHOG00000007723 ortholog_one2many 7 retrogenes
retro_chof_1026, retro_chof_1037, retro_chof_1808, retro_chof_2079, retro_chof_2149, retro_chof_2642, retro_chof_811,
Callithrix jacchus ENSCJAG00000005509 ortholog_one2one 1 retrogene
retro_cjac_4168,
Dasypus novemcinctus ENSDNOG00000024562 ortholog_one2one 4 retrogenes
retro_dnov_1226, retro_dnov_1419, retro_dnov_1519, retro_dnov_1871,
Macaca mulatta ENSMMUG00000008295 ortholog_one2many 1 retrogene
retro_mmul_2586,
Otolemur garnettii ENSOGAG00000017058 ortholog_one2one 1 retrogene
retro_ogar_1866,
Procavia capensis ENSPCAG00000003177 ortholog_one2one 1 retrogene
retro_pcap_269,
Pongo abelii ENSPPYG00000019418 ortholog_one2one 1 retrogene
retro_pabe_3765,
Pan troglodytes ENSPTRG00000021156 ortholog_one2one 1 retrogene
retro_ptro_3227,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_4843 80.56 95.13
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Download FASTA sequences of all ENSG00000158122 retrocopies