Parental gene:

C9ORF21, ENSCJAG00000005509

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:1:69145489..69157548(-)


>ENSCJAG00000005509
GCCTGCCTACCTGAACCAGGAAAAACTGAATTGCAAGGCGGCGCCGCCCCCGTCCCGACCCAAAGCGGACCCAGAGCGCG
GTCAGTTCCTGCGGCGCCCGTGCCCGAGCTGCCAGTGCTAGACGCCCGCGGGCAGCGGGTGCCGTTCGGCGCGCTGTTCC
GGGAGCGCCGCGCAGTGGTGGTGTTCGTGCGGCATTTCCTGTGTTACATCTGCAAGGAATACGTGGAGGATCTGGCCAGA
ATCCCCAAGAGTTTCTTACAAGAAGCAAATGTCACCTTGATAGTGATTGGACAGTCATCCTACCATCATATTGAGTCTTT
TTGCAAACTGACTGGATATTCTCATGAAATCTATGTCGATCCTGAGAGAGAAATTTATAAAAGATTGGGAATGAAAAGAG
GTGAAGAAATTGCCTCCTCAGGACAGAGCCCCCACGTAAAGTCAAATCTACTCTCAGGAAGCCTTCAGAGCCTGTGGCGG
GCAGTGACCGGCCCTCTCTTTGATTTTCAAGGAGACCCAGCTCAGCAAGGTGGGACCCTCATTTTAGGTCCAGGTAACAA
CATCCATTTTATACACCGCGATAAGAATAGATTGGATCACAAACCTATCAACTCTGTTTTACAGCTTGTAGGAGTTCAGC
ATGTGAACTTTACAAACAGGCCTTCAGTCATCCATGTGTGA

Library Parental gene expression (RPM)
SRP051959_spleen 13 .21 RPM
SRP051959_skeletal_muscle 7 .64 RPM
SRP051959_lymph_node 9 .50 RPM
SRP051959_lung 10 .07 RPM
SRP051959_liver 19 .21 RPM
SRP051959_kidney 18 .92 RPM
SRP051959_heart 14 .26 RPM
SRP051959_colon 9 .07 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000006422 ortholog_one2many 1 retrogene
retro_chof_1792,
Choloepus hoffmanni ENSCHOG00000007723 ortholog_one2many 7 retrogenes
retro_chof_1026, retro_chof_1037, retro_chof_1808, retro_chof_2079, retro_chof_2149, retro_chof_2642, retro_chof_811,
Dasypus novemcinctus ENSDNOG00000024562 ortholog_one2one 4 retrogenes
retro_dnov_1226, retro_dnov_1419, retro_dnov_1519, retro_dnov_1871,
Homo sapiens ENSG00000158122 ortholog_one2one 1 retrogene
retro_hsap_4843,
Macaca mulatta ENSMMUG00000008295 ortholog_one2many 1 retrogene
retro_mmul_2586,
Otolemur garnettii ENSOGAG00000017058 ortholog_one2one 1 retrogene
retro_ogar_1866,
Procavia capensis ENSPCAG00000003177 ortholog_one2one 1 retrogene
retro_pcap_269,
Pongo abelii ENSPPYG00000019418 ortholog_one2one 1 retrogene
retro_pabe_3765,
Pan troglodytes ENSPTRG00000021156 ortholog_one2one 1 retrogene
retro_ptro_3227,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_4168 74.61 89.67
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Download FASTA sequences of all ENSCJAG00000005509 retrocopies