Parental gene: | GTF3C6, ENSG00000155115 |
| Aliases: | GTF3C6, C6orf51, TFIIIC35, bA397G5.3 |
| Description: | general transcription factor IIIC, polypeptide 6, alpha 35kDa [Source:HGNC Symbol;Acc:20872] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 6:111279762..111289093(+) |
>ENSG00000155115
ATGGCGGCGGCGGCGGACGAGCGGAGTCCAGAGGACGGAGAAGACGAGGAAGAGGAGGAGCAGTTGGTTCTGGTGGAATT
ATCAGGAATTATTGATTCAGACTTCCTCTCAAAATGTGAAAATAAATGCAAGGTTTTGGGCATTGACACTGAGAGGCCCA
TTCTGCAAGTGGACAGCTGTGTCTTTGCTGGGGAGTATGAAGACACTCTAGGGACCTGTGTTATATTTGAAGAAAATGTT
GAACATGCTGATACAGAAGGCAATAATAAAACAGTGCTAAAATATAAATGCCATACAATGAAGAAGCTCAGCATGACAAG
AACTCTCCTGACAGAGAAGAAGGAAGGAGAAGAAAACATAGGTGGGGTGGAATGGCTGCAAATAAAGGATAATGATTTCT
CCTATCGACCCAACATGATTTGTAACTTTCTACATGAAAATGAAGACGAAGAAGTGGTAGCTTCAGCCCCAGATAAATCT
TTGGAATTGGAAGAGGAAGAGATTCAAATGAACGACAGTTCAAACCTGAGTTGTGAACAGGAGAAACCAATGCACTTGGA
AATAGAAGATTCTGGTCCTCTTATTGATATACCTTCTGAGACAGAAGGTTCTGTTTTTATGGAAACTCAAATGCTGCCTT
AG
ATGGCGGCGGCGGCGGACGAGCGGAGTCCAGAGGACGGAGAAGACGAGGAAGAGGAGGAGCAGTTGGTTCTGGTGGAATT
ATCAGGAATTATTGATTCAGACTTCCTCTCAAAATGTGAAAATAAATGCAAGGTTTTGGGCATTGACACTGAGAGGCCCA
TTCTGCAAGTGGACAGCTGTGTCTTTGCTGGGGAGTATGAAGACACTCTAGGGACCTGTGTTATATTTGAAGAAAATGTT
GAACATGCTGATACAGAAGGCAATAATAAAACAGTGCTAAAATATAAATGCCATACAATGAAGAAGCTCAGCATGACAAG
AACTCTCCTGACAGAGAAGAAGGAAGGAGAAGAAAACATAGGTGGGGTGGAATGGCTGCAAATAAAGGATAATGATTTCT
CCTATCGACCCAACATGATTTGTAACTTTCTACATGAAAATGAAGACGAAGAAGTGGTAGCTTCAGCCCCAGATAAATCT
TTGGAATTGGAAGAGGAAGAGATTCAAATGAACGACAGTTCAAACCTGAGTTGTGAACAGGAGAAACCAATGCACTTGGA
AATAGAAGATTCTGGTCCTCTTATTGATATACCTTCTGAGACAGAAGGTTCTGTTTTTATGGAAACTCAAATGCTGCCTT
AG
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 23 .57 RPM |
| bodymap2_lung | 10 .99 RPM |
| bodymap2_breast | 48 .91 RPM |
| bodymap2_adipose | 34 .97 RPM |
| bodymap2_adrenal | 50 .97 RPM |
| bodymap2_skeletal_muscle | 42 .85 RPM |
| bodymap2_thyroid | 47 .23 RPM |
| bodymap2_prostate | 26 .72 RPM |
| bodymap2_colon | 44 .16 RPM |
| bodymap2_testis | 77 .22 RPM |
| bodymap2_brain | 46 .55 RPM |
| bodymap2_heart | 39 .95 RPM |
| bodymap2_white_blood_cells | 26 .01 RPM |
| bodymap2_lymph_node | 23 .99 RPM |
| bodymap2_ovary | 66 .35 RPM |
| bodymap2_kidney | 56 .07 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000003535 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000005248 | ortholog_one2one | 2 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000014270 | ortholog_one2one | 4 retrogenes | |
| Gorilla gorilla | ENSGGOG00000010681 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000013919 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000012709 | ortholog_one2one | 3 retrogenes | |
| Monodelphis domestica | ENSMODG00000017924 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000010179 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000012846 | ortholog_one2one | 3 retrogenes | |
| Pan troglodytes | ENSPTRG00000018502 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_3714 | 71.34 | 76.06 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_4728 | 69.14 | 74.65 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_hsap_4735 | 92.46 | 92.96 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000155115 retrocopies